Hb_026144_030

Information

Type -
Description -
Location Contig26144: 27166-28030
Sequence    

Annotation

kegg
ID rcu:RCOM_0023970
description nitrate transporter, putative
nr
ID XP_012085446.1
description PREDICTED: high affinity nitrate transporter 2.5 [Jatropha curcas]
swissprot
ID Q9LPV5
description High affinity nitrate transporter 2.5 OS=Arabidopsis thaliana GN=NRT2.5 PE=2 SV=1
trembl
ID A0A067K305
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17788 PE=4 SV=1
Gene Ontology
ID GO:0005886
description high affinity nitrate transporter

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_026144_030 0.0 - - PREDICTED: high affinity nitrate transporter 2.5 [Jatropha curcas]
2 Hb_008111_010 0.0797044119 - - hypothetical protein VITISV_021527 [Vitis vinifera]
3 Hb_000614_190 0.0840074156 desease resistance Gene Name: ABC_membrane PREDICTED: putative ABC transporter C family member 15 [Jatropha curcas]
4 Hb_000767_010 0.0896615662 - - PREDICTED: geraniol 8-hydroxylase-like isoform X2 [Solanum lycopersicum]
5 Hb_001143_140 0.0947921898 - - Aldehyde dehydrogenase, putative [Ricinus communis]
6 Hb_123560_050 0.0957488423 - - PREDICTED: probable receptor-like protein kinase At5g24010 [Jatropha curcas]
7 Hb_007420_020 0.0961828951 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
8 Hb_003077_140 0.0985569625 - - hypothetical protein JCGZ_16294 [Jatropha curcas]
9 Hb_010880_010 0.0988020543 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
10 Hb_005054_280 0.0993360162 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
11 Hb_001706_020 0.1000069995 - - PREDICTED: organic cation/carnitine transporter 7 [Jatropha curcas]
12 Hb_001174_030 0.1019114166 - - unnamed protein product [Vitis vinifera]
13 Hb_000597_080 0.1156811383 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
14 Hb_001357_360 0.1163259501 - - zinc finger protein, putative [Ricinus communis]
15 Hb_005034_010 0.1179811656 - - alcohol dehydrogenase, putative [Ricinus communis]
16 Hb_004785_200 0.1200035327 - - PREDICTED: protein MKS1 [Jatropha curcas]
17 Hb_114310_050 0.1200951336 - - Iron(III)-zinc(II) purple acid phosphatase precursor family protein [Populus trichocarpa]
18 Hb_001819_010 0.1245256961 - - PREDICTED: potassium transporter 8 [Jatropha curcas]
19 Hb_001153_090 0.1248169288 - - PREDICTED: protein FAM63A [Jatropha curcas]
20 Hb_002010_070 0.1310676242 - - hypothetical protein EUGRSUZ_I027342, partial [Eucalyptus grandis]

Gene co-expression network

sample Hb_026144_030 Hb_026144_030 Hb_008111_010 Hb_008111_010 Hb_026144_030--Hb_008111_010 Hb_000614_190 Hb_000614_190 Hb_026144_030--Hb_000614_190 Hb_000767_010 Hb_000767_010 Hb_026144_030--Hb_000767_010 Hb_001143_140 Hb_001143_140 Hb_026144_030--Hb_001143_140 Hb_123560_050 Hb_123560_050 Hb_026144_030--Hb_123560_050 Hb_007420_020 Hb_007420_020 Hb_026144_030--Hb_007420_020 Hb_005054_280 Hb_005054_280 Hb_008111_010--Hb_005054_280 Hb_085010_010 Hb_085010_010 Hb_008111_010--Hb_085010_010 Hb_005306_020 Hb_005306_020 Hb_008111_010--Hb_005306_020 Hb_001971_020 Hb_001971_020 Hb_008111_010--Hb_001971_020 Hb_008111_010--Hb_001143_140 Hb_114310_050 Hb_114310_050 Hb_000614_190--Hb_114310_050 Hb_000614_190--Hb_005054_280 Hb_000614_190--Hb_007420_020 Hb_005034_010 Hb_005034_010 Hb_000614_190--Hb_005034_010 Hb_001174_030 Hb_001174_030 Hb_000614_190--Hb_001174_030 Hb_003077_140 Hb_003077_140 Hb_000767_010--Hb_003077_140 Hb_001357_360 Hb_001357_360 Hb_000767_010--Hb_001357_360 Hb_028872_100 Hb_028872_100 Hb_000767_010--Hb_028872_100 Hb_000767_010--Hb_008111_010 Hb_004007_230 Hb_004007_230 Hb_000767_010--Hb_004007_230 Hb_004307_070 Hb_004307_070 Hb_001143_140--Hb_004307_070 Hb_012743_020 Hb_012743_020 Hb_001143_140--Hb_012743_020 Hb_002000_130 Hb_002000_130 Hb_001143_140--Hb_002000_130 Hb_003226_030 Hb_003226_030 Hb_001143_140--Hb_003226_030 Hb_001143_140--Hb_000614_190 Hb_001819_010 Hb_001819_010 Hb_123560_050--Hb_001819_010 Hb_000377_160 Hb_000377_160 Hb_123560_050--Hb_000377_160 Hb_123560_050--Hb_003077_140 Hb_029866_110 Hb_029866_110 Hb_123560_050--Hb_029866_110 Hb_123560_050--Hb_007420_020 Hb_007420_020--Hb_114310_050 Hb_007420_020--Hb_005054_280 Hb_007420_010 Hb_007420_010 Hb_007420_020--Hb_007420_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 7.0399 2.71552 5.28927 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 5.77786 7.99143

CAGE analysis