Hb_007420_010

Information

Type -
Description -
Location Contig7420: 27770-30392
Sequence    

Annotation

kegg
ID rcu:RCOM_1579660
description receptor serine/threonine kinase, putative (EC:2.7.10.2)
nr
ID XP_012066194.1
description PREDICTED: probable receptor-like protein kinase At1g67000 isoform X2 [Jatropha curcas]
swissprot
ID Q9FLV4
description G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana GN=At5g24080 PE=2 SV=1
trembl
ID B9RIJ0
description Receptor serine/threonine kinase, putative OS=Ricinus communis GN=RCOM_1579660 PE=3 SV=1
Gene Ontology
ID GO:0016301
description glycerophosphodiester phosphodiesterase protein kinase domain-containing gdpdl2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007420_010 0.0 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X2 [Jatropha curcas]
2 Hb_167272_010 0.0686576395 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Vitis vinifera]
3 Hb_000501_040 0.0700887845 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_114310_050 0.0761221622 - - Iron(III)-zinc(II) purple acid phosphatase precursor family protein [Populus trichocarpa]
5 Hb_007420_020 0.0781825096 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
6 Hb_009803_030 0.0800237157 - - PREDICTED: probable receptor protein kinase TMK1 [Jatropha curcas]
7 Hb_001515_030 0.0882854437 - - UDP-glucosyltransferase, putative [Ricinus communis]
8 Hb_031862_020 0.1021393132 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
9 Hb_000649_280 0.1060244018 - - PREDICTED: F-box protein PP2-B10-like [Pyrus x bretschneideri]
10 Hb_005054_280 0.1062258456 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
11 Hb_005569_030 0.1086207496 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X1 [Jatropha curcas]
12 Hb_000037_010 0.1128767448 - - PREDICTED: cation/H(+) antiporter 18-like [Jatropha curcas]
13 Hb_000412_090 0.1141183868 - - receptor serine/threonine kinase, putative [Ricinus communis]
14 Hb_046101_010 0.1143178098 - - PREDICTED: putative serine/threonine-protein kinase-like protein CCR3 [Jatropha curcas]
15 Hb_000377_160 0.1163021352 - - PREDICTED: oligopeptide transporter 3 [Jatropha curcas]
16 Hb_000563_120 0.116886664 - - hypothetical protein JCGZ_18936 [Jatropha curcas]
17 Hb_033153_040 0.1186515413 - - o-methyltransferase, putative [Ricinus communis]
18 Hb_001369_070 0.1193500756 - - unnamed protein product [Vitis vinifera]
19 Hb_000085_220 0.1204164435 - - conserved hypothetical protein [Ricinus communis]
20 Hb_006269_010 0.1207158545 - - hypothetical protein JCGZ_21552 [Jatropha curcas]

Gene co-expression network

sample Hb_007420_010 Hb_007420_010 Hb_167272_010 Hb_167272_010 Hb_007420_010--Hb_167272_010 Hb_000501_040 Hb_000501_040 Hb_007420_010--Hb_000501_040 Hb_114310_050 Hb_114310_050 Hb_007420_010--Hb_114310_050 Hb_007420_020 Hb_007420_020 Hb_007420_010--Hb_007420_020 Hb_009803_030 Hb_009803_030 Hb_007420_010--Hb_009803_030 Hb_001515_030 Hb_001515_030 Hb_007420_010--Hb_001515_030 Hb_167272_010--Hb_001515_030 Hb_031862_020 Hb_031862_020 Hb_167272_010--Hb_031862_020 Hb_000237_070 Hb_000237_070 Hb_167272_010--Hb_000237_070 Hb_167272_010--Hb_009803_030 Hb_000085_220 Hb_000085_220 Hb_167272_010--Hb_000085_220 Hb_000501_040--Hb_031862_020 Hb_000501_040--Hb_167272_010 Hb_029576_100 Hb_029576_100 Hb_000501_040--Hb_029576_100 Hb_127661_010 Hb_127661_010 Hb_000501_040--Hb_127661_010 Hb_023344_130 Hb_023344_130 Hb_000501_040--Hb_023344_130 Hb_114310_050--Hb_007420_020 Hb_005054_280 Hb_005054_280 Hb_114310_050--Hb_005054_280 Hb_000614_190 Hb_000614_190 Hb_114310_050--Hb_000614_190 Hb_004306_140 Hb_004306_140 Hb_114310_050--Hb_004306_140 Hb_114310_050--Hb_001515_030 Hb_007420_020--Hb_005054_280 Hb_007420_020--Hb_000614_190 Hb_123560_050 Hb_123560_050 Hb_007420_020--Hb_123560_050 Hb_026144_030 Hb_026144_030 Hb_007420_020--Hb_026144_030 Hb_000819_010 Hb_000819_010 Hb_009803_030--Hb_000819_010 Hb_009803_030--Hb_001515_030 Hb_000280_110 Hb_000280_110 Hb_009803_030--Hb_000280_110 Hb_046101_010 Hb_046101_010 Hb_009803_030--Hb_046101_010 Hb_005569_030 Hb_005569_030 Hb_001515_030--Hb_005569_030 Hb_008040_060 Hb_008040_060 Hb_001515_030--Hb_008040_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.290207 0.108032 0.088462 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.165717 0.145182

CAGE analysis