Hb_001836_010

Information

Type -
Description -
Location Contig1836: 58650-70579
Sequence    

Annotation

kegg
ID fve:101303888
description uncharacterized protein LOC101303888
nr
ID XP_012078996.1
description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 [Jatropha curcas]
swissprot
ID Q9ZR08
description G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS=Arabidopsis thaliana GN=At4g03230 PE=3 SV=3
trembl
ID A0A067K7M8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13818 PE=4 SV=1
Gene Ontology
ID GO:0004674
description g-type lectin s-receptor-like serine threonine-protein kinase at4g03230 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17937: 58618-59901 , PASA_asmbl_17938: 59960-63336 , PASA_asmbl_17939: 65707-69662 , PASA_asmbl_17940: 69707-70341
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001836_010 0.0 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 [Jatropha curcas]
2 Hb_002818_070 0.0661723488 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
3 Hb_000009_390 0.0940796719 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 2 isoform X2 [Jatropha curcas]
4 Hb_007035_010 0.0985773503 - - PREDICTED: synaptotagmin-4 isoform X1 [Jatropha curcas]
5 Hb_000331_220 0.0999816112 - - conserved hypothetical protein [Ricinus communis]
6 Hb_003683_200 0.1019216391 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
7 Hb_006827_030 0.1039858231 - - oligopeptide transporter, putative [Ricinus communis]
8 Hb_003680_010 0.1115811629 - - UDP-glucosyltransferase, putative [Ricinus communis]
9 Hb_171168_010 0.1118356563 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
10 Hb_003077_140 0.1121490172 - - hypothetical protein JCGZ_16294 [Jatropha curcas]
11 Hb_001866_100 0.113166331 - - PREDICTED: uncharacterized protein LOC104212668 [Nicotiana sylvestris]
12 Hb_001514_150 0.1138048851 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
13 Hb_006588_020 0.1165100318 transcription factor TF Family: G2-like DNA binding protein, putative [Ricinus communis]
14 Hb_000680_020 0.1174457429 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
15 Hb_064293_010 0.1180125553 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
16 Hb_071130_020 0.1214217454 - - -
17 Hb_000025_590 0.1232933154 - - PREDICTED: cytochrome P450 94A1-like isoform X1 [Jatropha curcas]
18 Hb_002615_080 0.1271621148 - - PREDICTED: non-specific phospholipase C2 [Jatropha curcas]
19 Hb_000574_340 0.1297061221 - - hypothetical protein RCOM_0901420 [Ricinus communis]
20 Hb_002849_120 0.130562823 - - ferric reductase oxidase [Manihot esculenta]

Gene co-expression network

sample Hb_001836_010 Hb_001836_010 Hb_002818_070 Hb_002818_070 Hb_001836_010--Hb_002818_070 Hb_000009_390 Hb_000009_390 Hb_001836_010--Hb_000009_390 Hb_007035_010 Hb_007035_010 Hb_001836_010--Hb_007035_010 Hb_000331_220 Hb_000331_220 Hb_001836_010--Hb_000331_220 Hb_003683_200 Hb_003683_200 Hb_001836_010--Hb_003683_200 Hb_006827_030 Hb_006827_030 Hb_001836_010--Hb_006827_030 Hb_002818_070--Hb_000009_390 Hb_002818_070--Hb_000331_220 Hb_003077_140 Hb_003077_140 Hb_002818_070--Hb_003077_140 Hb_071130_020 Hb_071130_020 Hb_002818_070--Hb_071130_020 Hb_000680_020 Hb_000680_020 Hb_002818_070--Hb_000680_020 Hb_001866_100 Hb_001866_100 Hb_000009_390--Hb_001866_100 Hb_001856_110 Hb_001856_110 Hb_000009_390--Hb_001856_110 Hb_000009_390--Hb_007035_010 Hb_001514_150 Hb_001514_150 Hb_000009_390--Hb_001514_150 Hb_007035_010--Hb_001866_100 Hb_007035_010--Hb_006827_030 Hb_003680_010 Hb_003680_010 Hb_007035_010--Hb_003680_010 Hb_006588_020 Hb_006588_020 Hb_007035_010--Hb_006588_020 Hb_000112_040 Hb_000112_040 Hb_000331_220--Hb_000112_040 Hb_000331_220--Hb_071130_020 Hb_064293_010 Hb_064293_010 Hb_000331_220--Hb_064293_010 Hb_004994_200 Hb_004994_200 Hb_000331_220--Hb_004994_200 Hb_003683_200--Hb_000680_020 Hb_000116_330 Hb_000116_330 Hb_003683_200--Hb_000116_330 Hb_003683_200--Hb_001856_110 Hb_004525_020 Hb_004525_020 Hb_003683_200--Hb_004525_020 Hb_002849_120 Hb_002849_120 Hb_003683_200--Hb_002849_120 Hb_001579_060 Hb_001579_060 Hb_006827_030--Hb_001579_060 Hb_171168_010 Hb_171168_010 Hb_006827_030--Hb_171168_010 Hb_000049_170 Hb_000049_170 Hb_006827_030--Hb_000049_170 Hb_007113_020 Hb_007113_020 Hb_006827_030--Hb_007113_020 Hb_001883_010 Hb_001883_010 Hb_006827_030--Hb_001883_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0194435 8.90873 5.83809 3.9246 0.0546555 0.0695875
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0154302 0.0182155 0 4.35974 14.7058

CAGE analysis