Hb_000191_100

Information

Type -
Description -
Location Contig191: 113620-116099
Sequence    

Annotation

kegg
ID rcu:RCOM_0712310
description cytochrome P450, putative (EC:1.3.3.9)
nr
ID XP_002516294.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q9LUC5
description Cytochrome P450 72A15 OS=Arabidopsis thaliana GN=CYP72A15 PE=2 SV=1
trembl
ID B9RRC5
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0712310 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 72a15-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_19036: 113638-114660 , PASA_asmbl_19037: 114678-116058
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000191_100 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_016637_020 0.0848432022 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
3 Hb_031862_200 0.0932375915 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At3g14460 [Vitis vinifera]
4 Hb_001819_010 0.0971803564 - - PREDICTED: potassium transporter 8 [Jatropha curcas]
5 Hb_029866_110 0.098655439 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter C family member 10-like [Jatropha curcas]
6 Hb_007205_020 0.1108775642 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
7 Hb_123560_050 0.114087134 - - PREDICTED: probable receptor-like protein kinase At5g24010 [Jatropha curcas]
8 Hb_170878_050 0.1200583395 - - retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]
9 Hb_002888_060 0.1221587953 - - PREDICTED: phospholipase SGR2 isoform X1 [Jatropha curcas]
10 Hb_005496_170 0.1223581435 - - sigma factor sigb regulation protein rsbq, putative [Ricinus communis]
11 Hb_003683_200 0.127799615 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
12 Hb_127661_010 0.1296285415 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_003077_140 0.1330371246 - - hypothetical protein JCGZ_16294 [Jatropha curcas]
14 Hb_010880_010 0.1333527905 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
15 Hb_005470_040 0.134561311 - - hypothetical protein POPTR_0015s09760g [Populus trichocarpa]
16 Hb_001866_100 0.1349665356 - - PREDICTED: uncharacterized protein LOC104212668 [Nicotiana sylvestris]
17 Hb_004785_200 0.1353109435 - - PREDICTED: protein MKS1 [Jatropha curcas]
18 Hb_003494_180 0.1354760516 - - PREDICTED: vacuolar amino acid transporter 1-like [Jatropha curcas]
19 Hb_000442_170 0.1357264384 - - PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
20 Hb_003517_100 0.1367104886 transcription factor TF Family: GRAS -

Gene co-expression network

sample Hb_000191_100 Hb_000191_100 Hb_016637_020 Hb_016637_020 Hb_000191_100--Hb_016637_020 Hb_031862_200 Hb_031862_200 Hb_000191_100--Hb_031862_200 Hb_001819_010 Hb_001819_010 Hb_000191_100--Hb_001819_010 Hb_029866_110 Hb_029866_110 Hb_000191_100--Hb_029866_110 Hb_007205_020 Hb_007205_020 Hb_000191_100--Hb_007205_020 Hb_123560_050 Hb_123560_050 Hb_000191_100--Hb_123560_050 Hb_127661_010 Hb_127661_010 Hb_016637_020--Hb_127661_010 Hb_003494_180 Hb_003494_180 Hb_016637_020--Hb_003494_180 Hb_016637_020--Hb_007205_020 Hb_170878_050 Hb_170878_050 Hb_016637_020--Hb_170878_050 Hb_016637_020--Hb_029866_110 Hb_004785_200 Hb_004785_200 Hb_031862_200--Hb_004785_200 Hb_031862_200--Hb_016637_020 Hb_001866_100 Hb_001866_100 Hb_031862_200--Hb_001866_100 Hb_007035_010 Hb_007035_010 Hb_031862_200--Hb_007035_010 Hb_003680_010 Hb_003680_010 Hb_031862_200--Hb_003680_010 Hb_001819_010--Hb_123560_050 Hb_006788_100 Hb_006788_100 Hb_001819_010--Hb_006788_100 Hb_001819_010--Hb_170878_050 Hb_001819_010--Hb_029866_110 Hb_009659_040 Hb_009659_040 Hb_001819_010--Hb_009659_040 Hb_029866_110--Hb_170878_050 Hb_001660_050 Hb_001660_050 Hb_029866_110--Hb_001660_050 Hb_029866_110--Hb_123560_050 Hb_029866_110--Hb_009659_040 Hb_031201_010 Hb_031201_010 Hb_007205_020--Hb_031201_010 Hb_002845_020 Hb_002845_020 Hb_007205_020--Hb_002845_020 Hb_007205_020--Hb_003494_180 Hb_007205_020--Hb_001866_100 Hb_005496_170 Hb_005496_170 Hb_007205_020--Hb_005496_170 Hb_000377_160 Hb_000377_160 Hb_123560_050--Hb_000377_160 Hb_003077_140 Hb_003077_140 Hb_123560_050--Hb_003077_140 Hb_007420_020 Hb_007420_020 Hb_123560_050--Hb_007420_020 Hb_026144_030 Hb_026144_030 Hb_123560_050--Hb_026144_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.064744 14.9931 10.2998 6.60722 0.0467655 0.377663
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0454138 0.232263 0.372628 19.0435 22.8022

CAGE analysis