Hb_031949_010

Information

Type -
Description -
Location Contig31949: 4453-6816
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031949_010 0.0 - - -
2 Hb_005470_040 0.0923682436 - - hypothetical protein POPTR_0015s09760g [Populus trichocarpa]
3 Hb_000377_160 0.1067483401 - - PREDICTED: oligopeptide transporter 3 [Jatropha curcas]
4 Hb_001856_110 0.1080743496 - - PREDICTED: cellulose synthase-like protein G2 [Populus euphratica]
5 Hb_000009_390 0.1129006411 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 2 isoform X2 [Jatropha curcas]
6 Hb_026053_030 0.1129416843 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
7 Hb_000417_150 0.1193311382 - - hypothetical protein JCGZ_21586 [Jatropha curcas]
8 Hb_003767_010 0.1205416985 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Jatropha curcas]
9 Hb_109489_010 0.1232536699 - - multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis]
10 Hb_000685_140 0.1241446071 - - PREDICTED: uncharacterized protein LOC105645669 [Jatropha curcas]
11 Hb_000649_280 0.1277210692 - - PREDICTED: F-box protein PP2-B10-like [Pyrus x bretschneideri]
12 Hb_123560_050 0.1294605991 - - PREDICTED: probable receptor-like protein kinase At5g24010 [Jatropha curcas]
13 Hb_000101_320 0.1295318158 - - -
14 Hb_000600_080 0.1369023137 - - -
15 Hb_048476_070 0.1370591603 - - conserved hypothetical protein [Ricinus communis]
16 Hb_028872_100 0.1372506749 - - PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
17 Hb_001357_360 0.1372708483 - - zinc finger protein, putative [Ricinus communis]
18 Hb_016637_020 0.1415398689 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
19 Hb_001411_100 0.1433741405 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
20 Hb_001452_090 0.1444674085 - - PREDICTED: serine carboxypeptidase II-3-like [Vitis vinifera]

Gene co-expression network

sample Hb_031949_010 Hb_031949_010 Hb_005470_040 Hb_005470_040 Hb_031949_010--Hb_005470_040 Hb_000377_160 Hb_000377_160 Hb_031949_010--Hb_000377_160 Hb_001856_110 Hb_001856_110 Hb_031949_010--Hb_001856_110 Hb_000009_390 Hb_000009_390 Hb_031949_010--Hb_000009_390 Hb_026053_030 Hb_026053_030 Hb_031949_010--Hb_026053_030 Hb_000417_150 Hb_000417_150 Hb_031949_010--Hb_000417_150 Hb_000264_340 Hb_000264_340 Hb_005470_040--Hb_000264_340 Hb_001357_360 Hb_001357_360 Hb_005470_040--Hb_001357_360 Hb_005470_040--Hb_000377_160 Hb_109489_010 Hb_109489_010 Hb_005470_040--Hb_109489_010 Hb_123560_050 Hb_123560_050 Hb_005470_040--Hb_123560_050 Hb_000649_280 Hb_000649_280 Hb_000377_160--Hb_000649_280 Hb_003767_010 Hb_003767_010 Hb_000377_160--Hb_003767_010 Hb_000377_160--Hb_123560_050 Hb_000563_120 Hb_000563_120 Hb_000377_160--Hb_000563_120 Hb_001856_110--Hb_000009_390 Hb_071130_020 Hb_071130_020 Hb_001856_110--Hb_071130_020 Hb_003683_200 Hb_003683_200 Hb_001856_110--Hb_003683_200 Hb_000680_020 Hb_000680_020 Hb_001856_110--Hb_000680_020 Hb_003494_180 Hb_003494_180 Hb_001856_110--Hb_003494_180 Hb_001866_100 Hb_001866_100 Hb_000009_390--Hb_001866_100 Hb_002818_070 Hb_002818_070 Hb_000009_390--Hb_002818_070 Hb_001836_010 Hb_001836_010 Hb_000009_390--Hb_001836_010 Hb_007035_010 Hb_007035_010 Hb_000009_390--Hb_007035_010 Hb_001514_150 Hb_001514_150 Hb_000009_390--Hb_001514_150 Hb_026053_030--Hb_000417_150 Hb_000044_050 Hb_000044_050 Hb_026053_030--Hb_000044_050 Hb_004007_230 Hb_004007_230 Hb_026053_030--Hb_004007_230 Hb_011344_140 Hb_011344_140 Hb_026053_030--Hb_011344_140 Hb_001907_020 Hb_001907_020 Hb_026053_030--Hb_001907_020 Hb_028872_100 Hb_028872_100 Hb_000417_150--Hb_028872_100 Hb_000417_150--Hb_004007_230 Hb_000417_150--Hb_000044_050 Hb_001411_100 Hb_001411_100 Hb_000417_150--Hb_001411_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.319765 0.0815639 0.0597917 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.250074 0.366115

CAGE analysis