Hb_000417_150

Information

Type -
Description -
Location Contig417: 110136-116387
Sequence    

Annotation

kegg
ID cit:102607237
description probable LRR receptor-like serine/threonine-protein kinase At3g47570-like
nr
ID KDP21115.1
description hypothetical protein JCGZ_21586 [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067JM92
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21586 PE=4 SV=1
Gene Ontology
ID GO:0016021
description leucine-rich repeat protein kinase family

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000417_150 0.0 - - hypothetical protein JCGZ_21586 [Jatropha curcas]
2 Hb_026053_030 0.0679965926 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
3 Hb_028872_100 0.1111233654 - - PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
4 Hb_004007_230 0.1174745909 - - PREDICTED: putative formamidase C869.04 isoform X1 [Jatropha curcas]
5 Hb_031949_010 0.1193311382 - - -
6 Hb_000044_050 0.1224682292 - - PREDICTED: amino acid permease 6-like isoform X1 [Jatropha curcas]
7 Hb_001411_100 0.1287605299 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
8 Hb_000685_140 0.1298860921 - - PREDICTED: uncharacterized protein LOC105645669 [Jatropha curcas]
9 Hb_067345_020 0.1336385331 - - PREDICTED: uncharacterized protein LOC105632434 [Jatropha curcas]
10 Hb_172426_010 0.1359186084 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curcas]
11 Hb_004994_200 0.1381897155 - - PREDICTED: uncharacterized protein LOC105174340 [Sesamum indicum]
12 Hb_005470_040 0.1385192059 - - hypothetical protein POPTR_0015s09760g [Populus trichocarpa]
13 Hb_001452_090 0.1393574637 - - PREDICTED: serine carboxypeptidase II-3-like [Vitis vinifera]
14 Hb_000236_430 0.1425852017 - - PREDICTED: uncharacterized protein LOC105633302 [Jatropha curcas]
15 Hb_001357_360 0.1428230738 - - zinc finger protein, putative [Ricinus communis]
16 Hb_000101_320 0.1454382277 - - -
17 Hb_005306_020 0.1474835665 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Jatropha curcas]
18 Hb_008195_020 0.1489962216 - - Vacuolar-processing enzyme precursor [Ricinus communis]
19 Hb_000767_010 0.1497818201 - - PREDICTED: geraniol 8-hydroxylase-like isoform X2 [Solanum lycopersicum]
20 Hb_000009_390 0.1500427234 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 2 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000417_150 Hb_000417_150 Hb_026053_030 Hb_026053_030 Hb_000417_150--Hb_026053_030 Hb_028872_100 Hb_028872_100 Hb_000417_150--Hb_028872_100 Hb_004007_230 Hb_004007_230 Hb_000417_150--Hb_004007_230 Hb_031949_010 Hb_031949_010 Hb_000417_150--Hb_031949_010 Hb_000044_050 Hb_000044_050 Hb_000417_150--Hb_000044_050 Hb_001411_100 Hb_001411_100 Hb_000417_150--Hb_001411_100 Hb_026053_030--Hb_000044_050 Hb_026053_030--Hb_004007_230 Hb_026053_030--Hb_031949_010 Hb_011344_140 Hb_011344_140 Hb_026053_030--Hb_011344_140 Hb_001907_020 Hb_001907_020 Hb_026053_030--Hb_001907_020 Hb_000685_140 Hb_000685_140 Hb_028872_100--Hb_000685_140 Hb_028872_100--Hb_001411_100 Hb_000767_010 Hb_000767_010 Hb_028872_100--Hb_000767_010 Hb_000101_320 Hb_000101_320 Hb_028872_100--Hb_000101_320 Hb_005306_020 Hb_005306_020 Hb_028872_100--Hb_005306_020 Hb_001357_360 Hb_001357_360 Hb_004007_230--Hb_001357_360 Hb_004143_140 Hb_004143_140 Hb_004007_230--Hb_004143_140 Hb_004007_230--Hb_000044_050 Hb_003077_140 Hb_003077_140 Hb_004007_230--Hb_003077_140 Hb_004007_230--Hb_000767_010 Hb_005470_040 Hb_005470_040 Hb_031949_010--Hb_005470_040 Hb_000377_160 Hb_000377_160 Hb_031949_010--Hb_000377_160 Hb_001856_110 Hb_001856_110 Hb_031949_010--Hb_001856_110 Hb_000009_390 Hb_000009_390 Hb_031949_010--Hb_000009_390 Hb_008195_020 Hb_008195_020 Hb_000044_050--Hb_008195_020 Hb_001989_080 Hb_001989_080 Hb_000044_050--Hb_001989_080 Hb_000044_050--Hb_004143_140 Hb_001411_100--Hb_000685_140 Hb_000600_080 Hb_000600_080 Hb_001411_100--Hb_000600_080 Hb_001411_100--Hb_000101_320 Hb_001452_090 Hb_001452_090 Hb_001411_100--Hb_001452_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.21513 0.146225 0.263498 0.00586308 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.517881 1.29513

CAGE analysis