Hb_000101_320

Information

Type -
Description -
Location Contig101: 308955-317182
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000101_320 0.0 - - -
2 Hb_001452_090 0.0509550466 - - PREDICTED: serine carboxypeptidase II-3-like [Vitis vinifera]
3 Hb_000685_140 0.0609314975 - - PREDICTED: uncharacterized protein LOC105645669 [Jatropha curcas]
4 Hb_008834_010 0.1067775399 - - hypothetical protein POPTR_0016s04660g [Populus trichocarpa]
5 Hb_001411_100 0.1085259755 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
6 Hb_028872_100 0.1160669059 - - PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
7 Hb_000009_390 0.1160836171 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 2 isoform X2 [Jatropha curcas]
8 Hb_000600_080 0.1210060375 - - -
9 Hb_031949_010 0.1295318158 - - -
10 Hb_072173_010 0.1362956195 - - PREDICTED: putative cysteine-rich receptor-like protein kinase 34 [Jatropha curcas]
11 Hb_004312_020 0.1410441122 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000417_150 0.1454382277 - - hypothetical protein JCGZ_21586 [Jatropha curcas]
13 Hb_001866_100 0.1476059138 - - PREDICTED: uncharacterized protein LOC104212668 [Nicotiana sylvestris]
14 Hb_001514_150 0.1506908441 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
15 Hb_001856_110 0.1552320001 - - PREDICTED: cellulose synthase-like protein G2 [Populus euphratica]
16 Hb_006588_020 0.1566790916 transcription factor TF Family: G2-like DNA binding protein, putative [Ricinus communis]
17 Hb_005092_090 0.1580501592 - - cold regulated protein [Manihot esculenta]
18 Hb_005470_040 0.158620891 - - hypothetical protein POPTR_0015s09760g [Populus trichocarpa]
19 Hb_001366_260 0.1610784968 - - T4.15 [Malus x robusta]
20 Hb_003913_040 0.1628237625 - - ferric reductase oxidase [Manihot esculenta]

Gene co-expression network

sample Hb_000101_320 Hb_000101_320 Hb_001452_090 Hb_001452_090 Hb_000101_320--Hb_001452_090 Hb_000685_140 Hb_000685_140 Hb_000101_320--Hb_000685_140 Hb_008834_010 Hb_008834_010 Hb_000101_320--Hb_008834_010 Hb_001411_100 Hb_001411_100 Hb_000101_320--Hb_001411_100 Hb_028872_100 Hb_028872_100 Hb_000101_320--Hb_028872_100 Hb_000009_390 Hb_000009_390 Hb_000101_320--Hb_000009_390 Hb_001452_090--Hb_000685_140 Hb_001452_090--Hb_001411_100 Hb_001452_090--Hb_028872_100 Hb_001452_090--Hb_000009_390 Hb_001452_090--Hb_008834_010 Hb_000685_140--Hb_001411_100 Hb_000685_140--Hb_028872_100 Hb_000600_080 Hb_000600_080 Hb_000685_140--Hb_000600_080 Hb_000685_140--Hb_008834_010 Hb_017225_030 Hb_017225_030 Hb_008834_010--Hb_017225_030 Hb_004312_020 Hb_004312_020 Hb_008834_010--Hb_004312_020 Hb_000260_730 Hb_000260_730 Hb_008834_010--Hb_000260_730 Hb_001411_100--Hb_000600_080 Hb_001411_100--Hb_028872_100 Hb_000417_150 Hb_000417_150 Hb_001411_100--Hb_000417_150 Hb_000767_010 Hb_000767_010 Hb_028872_100--Hb_000767_010 Hb_028872_100--Hb_000417_150 Hb_005306_020 Hb_005306_020 Hb_028872_100--Hb_005306_020 Hb_001866_100 Hb_001866_100 Hb_000009_390--Hb_001866_100 Hb_002818_070 Hb_002818_070 Hb_000009_390--Hb_002818_070 Hb_001856_110 Hb_001856_110 Hb_000009_390--Hb_001856_110 Hb_001836_010 Hb_001836_010 Hb_000009_390--Hb_001836_010 Hb_007035_010 Hb_007035_010 Hb_000009_390--Hb_007035_010 Hb_001514_150 Hb_001514_150 Hb_000009_390--Hb_001514_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.069674 0.0165455 0.0163392 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0605047 0.154555

CAGE analysis