Hb_000563_120

Information

Type -
Description -
Location Contig563: 67330-69249
Sequence    

Annotation

kegg
ID rcu:RCOM_0683010
description hypothetical protein
nr
ID KDP27856.1
description hypothetical protein JCGZ_18936 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JV62
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18936 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_48884: 67668-68410
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000563_120 0.0 - - hypothetical protein JCGZ_18936 [Jatropha curcas]
2 Hb_114310_050 0.0985311926 - - Iron(III)-zinc(II) purple acid phosphatase precursor family protein [Populus trichocarpa]
3 Hb_001971_020 0.0992335426 - - PREDICTED: alpha-dioxygenase 2 [Populus euphratica]
4 Hb_000649_280 0.0994716081 - - PREDICTED: F-box protein PP2-B10-like [Pyrus x bretschneideri]
5 Hb_000377_160 0.1025019763 - - PREDICTED: oligopeptide transporter 3 [Jatropha curcas]
6 Hb_001085_230 0.1042074166 - - PREDICTED: receptor like protein kinase S.2 [Jatropha curcas]
7 Hb_009803_030 0.1116380485 - - PREDICTED: probable receptor protein kinase TMK1 [Jatropha curcas]
8 Hb_005054_280 0.1152784794 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
9 Hb_002600_010 0.1154842234 - - Allene oxide cyclase 4, chloroplast precursor, putative [Ricinus communis]
10 Hb_007420_010 0.116886664 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X2 [Jatropha curcas]
11 Hb_007420_020 0.1185977117 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
12 Hb_001357_360 0.121914458 - - zinc finger protein, putative [Ricinus communis]
13 Hb_000037_010 0.1230892857 - - PREDICTED: cation/H(+) antiporter 18-like [Jatropha curcas]
14 Hb_123560_050 0.123631601 - - PREDICTED: probable receptor-like protein kinase At5g24010 [Jatropha curcas]
15 Hb_000614_190 0.1249961179 desease resistance Gene Name: ABC_membrane PREDICTED: putative ABC transporter C family member 15 [Jatropha curcas]
16 Hb_011344_140 0.1266312168 - - PREDICTED: geraniol 8-hydroxylase-like [Jatropha curcas]
17 Hb_008111_010 0.1294043922 - - hypothetical protein VITISV_021527 [Vitis vinifera]
18 Hb_107543_010 0.1296388643 - - Cysteine-rich RLK 10, putative [Theobroma cacao]
19 Hb_043939_010 0.1309949539 - - hypothetical protein B456_N011100 [Gossypium raimondii]
20 Hb_006316_030 0.1310825072 - - aldehyde oxidase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000563_120 Hb_000563_120 Hb_114310_050 Hb_114310_050 Hb_000563_120--Hb_114310_050 Hb_001971_020 Hb_001971_020 Hb_000563_120--Hb_001971_020 Hb_000649_280 Hb_000649_280 Hb_000563_120--Hb_000649_280 Hb_000377_160 Hb_000377_160 Hb_000563_120--Hb_000377_160 Hb_001085_230 Hb_001085_230 Hb_000563_120--Hb_001085_230 Hb_009803_030 Hb_009803_030 Hb_000563_120--Hb_009803_030 Hb_007420_020 Hb_007420_020 Hb_114310_050--Hb_007420_020 Hb_005054_280 Hb_005054_280 Hb_114310_050--Hb_005054_280 Hb_000614_190 Hb_000614_190 Hb_114310_050--Hb_000614_190 Hb_007420_010 Hb_007420_010 Hb_114310_050--Hb_007420_010 Hb_004306_140 Hb_004306_140 Hb_114310_050--Hb_004306_140 Hb_001515_030 Hb_001515_030 Hb_114310_050--Hb_001515_030 Hb_001357_360 Hb_001357_360 Hb_001971_020--Hb_001357_360 Hb_008111_010 Hb_008111_010 Hb_001971_020--Hb_008111_010 Hb_005306_020 Hb_005306_020 Hb_001971_020--Hb_005306_020 Hb_000264_340 Hb_000264_340 Hb_001971_020--Hb_000264_340 Hb_007320_020 Hb_007320_020 Hb_001971_020--Hb_007320_020 Hb_000649_280--Hb_000377_160 Hb_003767_010 Hb_003767_010 Hb_000649_280--Hb_003767_010 Hb_000649_280--Hb_007420_010 Hb_001907_020 Hb_001907_020 Hb_000649_280--Hb_001907_020 Hb_123560_050 Hb_123560_050 Hb_000649_280--Hb_123560_050 Hb_000377_160--Hb_003767_010 Hb_000377_160--Hb_123560_050 Hb_005470_040 Hb_005470_040 Hb_000377_160--Hb_005470_040 Hb_031949_010 Hb_031949_010 Hb_000377_160--Hb_031949_010 Hb_000037_010 Hb_000037_010 Hb_001085_230--Hb_000037_010 Hb_001819_010 Hb_001819_010 Hb_001085_230--Hb_001819_010 Hb_001085_230--Hb_123560_050 Hb_007919_030 Hb_007919_030 Hb_001085_230--Hb_007919_030 Hb_001085_230--Hb_000377_160 Hb_009803_030--Hb_007420_010 Hb_167272_010 Hb_167272_010 Hb_009803_030--Hb_167272_010 Hb_000819_010 Hb_000819_010 Hb_009803_030--Hb_000819_010 Hb_009803_030--Hb_001515_030 Hb_000280_110 Hb_000280_110 Hb_009803_030--Hb_000280_110 Hb_046101_010 Hb_046101_010 Hb_009803_030--Hb_046101_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.256896 20.2346 3.73943 6.80718 0.0799446 0.156873
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0538955 0 0 11.9724 10.4757

CAGE analysis