Hb_001085_230

Information

Type -
Description -
Location Contig1085: 173422-175920
Sequence    

Annotation

kegg
ID rcu:RCOM_1019790
description hypothetical protein
nr
ID XP_012071146.1
description PREDICTED: receptor like protein kinase S.2 [Jatropha curcas]
swissprot
ID O48837
description Receptor like protein kinase S.2 OS=Arabidopsis thaliana GN=LECRKS2 PE=2 SV=2
trembl
ID A0A067KT28
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01128 PE=3 SV=1
Gene Ontology
ID GO:0005886
description receptor like protein kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001085_230 0.0 - - PREDICTED: receptor like protein kinase S.2 [Jatropha curcas]
2 Hb_000037_010 0.098427665 - - PREDICTED: cation/H(+) antiporter 18-like [Jatropha curcas]
3 Hb_001819_010 0.0996213154 - - PREDICTED: potassium transporter 8 [Jatropha curcas]
4 Hb_123560_050 0.10319753 - - PREDICTED: probable receptor-like protein kinase At5g24010 [Jatropha curcas]
5 Hb_000563_120 0.1042074166 - - hypothetical protein JCGZ_18936 [Jatropha curcas]
6 Hb_007919_030 0.1081012491 - - -
7 Hb_000377_160 0.1119040734 - - PREDICTED: oligopeptide transporter 3 [Jatropha curcas]
8 Hb_000808_220 0.1142768352 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump 1-like [Jatropha curcas]
9 Hb_000163_250 0.1179898322 - - unnamed protein product [Vitis vinifera]
10 Hb_001946_060 0.1195290059 - - PREDICTED: TBC1 domain family member 13-like isoform X1 [Jatropha curcas]
11 Hb_006316_030 0.1206117572 - - aldehyde oxidase, putative [Ricinus communis]
12 Hb_000649_280 0.1221450407 - - PREDICTED: F-box protein PP2-B10-like [Pyrus x bretschneideri]
13 Hb_114310_050 0.1282197254 - - Iron(III)-zinc(II) purple acid phosphatase precursor family protein [Populus trichocarpa]
14 Hb_001675_130 0.1291263809 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein GLABRA 2 [Jatropha curcas]
15 Hb_032717_010 0.1318794897 - - unnamed protein product [Vitis vinifera]
16 Hb_002217_200 0.1324537535 - - PREDICTED: gibberellin 2-beta-dioxygenase 2 [Jatropha curcas]
17 Hb_003767_010 0.1330269865 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Jatropha curcas]
18 Hb_007420_020 0.1342938335 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
19 Hb_109489_010 0.1342983834 - - multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis]
20 Hb_000264_340 0.1351846647 - - PREDICTED: callose synthase 11-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001085_230 Hb_001085_230 Hb_000037_010 Hb_000037_010 Hb_001085_230--Hb_000037_010 Hb_001819_010 Hb_001819_010 Hb_001085_230--Hb_001819_010 Hb_123560_050 Hb_123560_050 Hb_001085_230--Hb_123560_050 Hb_000563_120 Hb_000563_120 Hb_001085_230--Hb_000563_120 Hb_007919_030 Hb_007919_030 Hb_001085_230--Hb_007919_030 Hb_000377_160 Hb_000377_160 Hb_001085_230--Hb_000377_160 Hb_009803_030 Hb_009803_030 Hb_000037_010--Hb_009803_030 Hb_000163_250 Hb_000163_250 Hb_000037_010--Hb_000163_250 Hb_046101_010 Hb_046101_010 Hb_000037_010--Hb_046101_010 Hb_114310_050 Hb_114310_050 Hb_000037_010--Hb_114310_050 Hb_023344_130 Hb_023344_130 Hb_000037_010--Hb_023344_130 Hb_001819_010--Hb_123560_050 Hb_006788_100 Hb_006788_100 Hb_001819_010--Hb_006788_100 Hb_170878_050 Hb_170878_050 Hb_001819_010--Hb_170878_050 Hb_029866_110 Hb_029866_110 Hb_001819_010--Hb_029866_110 Hb_000191_100 Hb_000191_100 Hb_001819_010--Hb_000191_100 Hb_009659_040 Hb_009659_040 Hb_001819_010--Hb_009659_040 Hb_123560_050--Hb_000377_160 Hb_003077_140 Hb_003077_140 Hb_123560_050--Hb_003077_140 Hb_123560_050--Hb_029866_110 Hb_007420_020 Hb_007420_020 Hb_123560_050--Hb_007420_020 Hb_026144_030 Hb_026144_030 Hb_123560_050--Hb_026144_030 Hb_000563_120--Hb_114310_050 Hb_001971_020 Hb_001971_020 Hb_000563_120--Hb_001971_020 Hb_000649_280 Hb_000649_280 Hb_000563_120--Hb_000649_280 Hb_000563_120--Hb_000377_160 Hb_000563_120--Hb_009803_030 Hb_007919_030--Hb_000163_250 Hb_001675_130 Hb_001675_130 Hb_007919_030--Hb_001675_130 Hb_001946_060 Hb_001946_060 Hb_007919_030--Hb_001946_060 Hb_002217_200 Hb_002217_200 Hb_007919_030--Hb_002217_200 Hb_007919_030--Hb_001819_010 Hb_000377_160--Hb_000649_280 Hb_003767_010 Hb_003767_010 Hb_000377_160--Hb_003767_010 Hb_005470_040 Hb_005470_040 Hb_000377_160--Hb_005470_040 Hb_031949_010 Hb_031949_010 Hb_000377_160--Hb_031949_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0426531 2.89494 0.913199 1.00554 0.0681408 0.0910832
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0139091 0 2.59598 1.89217

CAGE analysis