Hb_000649_280

Information

Type -
Description -
Location Contig649: 294971-296442
Sequence    

Annotation

kegg
ID pxb:103968087
description F-box protein PP2-B10-like
nr
ID XP_009379693.1
description PREDICTED: F-box protein PP2-B10-like [Pyrus x bretschneideri]
swissprot
ID Q9ZVQ6
description F-box protein PP2-B10 OS=Arabidopsis thaliana GN=PP2B10 PE=1 SV=1
trembl
ID G8A220
description F-box protein PP2-B1 OS=Medicago truncatula GN=MTR_1g100597 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000649_280 0.0 - - PREDICTED: F-box protein PP2-B10-like [Pyrus x bretschneideri]
2 Hb_000377_160 0.0546370388 - - PREDICTED: oligopeptide transporter 3 [Jatropha curcas]
3 Hb_003767_010 0.0981388544 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Jatropha curcas]
4 Hb_000563_120 0.0994716081 - - hypothetical protein JCGZ_18936 [Jatropha curcas]
5 Hb_007420_010 0.1060244018 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X2 [Jatropha curcas]
6 Hb_001907_020 0.1121395373 - - PREDICTED: receptor-like protein 12 [Vitis vinifera]
7 Hb_123560_050 0.1124490116 - - PREDICTED: probable receptor-like protein kinase At5g24010 [Jatropha curcas]
8 Hb_011344_140 0.114158428 - - PREDICTED: geraniol 8-hydroxylase-like [Jatropha curcas]
9 Hb_001085_230 0.1221450407 - - PREDICTED: receptor like protein kinase S.2 [Jatropha curcas]
10 Hb_007420_020 0.1240474672 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
11 Hb_031949_010 0.1277210692 - - -
12 Hb_001675_130 0.1285987024 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein GLABRA 2 [Jatropha curcas]
13 Hb_009803_030 0.1345880978 - - PREDICTED: probable receptor protein kinase TMK1 [Jatropha curcas]
14 Hb_114310_050 0.1360546015 - - Iron(III)-zinc(II) purple acid phosphatase precursor family protein [Populus trichocarpa]
15 Hb_000684_010 0.1380566961 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
16 Hb_007919_030 0.1382764527 - - -
17 Hb_007320_020 0.1392457852 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X2 [Populus euphratica]
18 Hb_005470_040 0.1398808338 - - hypothetical protein POPTR_0015s09760g [Populus trichocarpa]
19 Hb_107543_010 0.1399898559 - - Cysteine-rich RLK 10, putative [Theobroma cacao]
20 Hb_000037_010 0.140192269 - - PREDICTED: cation/H(+) antiporter 18-like [Jatropha curcas]

Gene co-expression network

sample Hb_000649_280 Hb_000649_280 Hb_000377_160 Hb_000377_160 Hb_000649_280--Hb_000377_160 Hb_003767_010 Hb_003767_010 Hb_000649_280--Hb_003767_010 Hb_000563_120 Hb_000563_120 Hb_000649_280--Hb_000563_120 Hb_007420_010 Hb_007420_010 Hb_000649_280--Hb_007420_010 Hb_001907_020 Hb_001907_020 Hb_000649_280--Hb_001907_020 Hb_123560_050 Hb_123560_050 Hb_000649_280--Hb_123560_050 Hb_000377_160--Hb_003767_010 Hb_000377_160--Hb_123560_050 Hb_005470_040 Hb_005470_040 Hb_000377_160--Hb_005470_040 Hb_000377_160--Hb_000563_120 Hb_031949_010 Hb_031949_010 Hb_000377_160--Hb_031949_010 Hb_029866_110 Hb_029866_110 Hb_003767_010--Hb_029866_110 Hb_002217_200 Hb_002217_200 Hb_003767_010--Hb_002217_200 Hb_003767_010--Hb_123560_050 Hb_109489_010 Hb_109489_010 Hb_003767_010--Hb_109489_010 Hb_114310_050 Hb_114310_050 Hb_000563_120--Hb_114310_050 Hb_001971_020 Hb_001971_020 Hb_000563_120--Hb_001971_020 Hb_001085_230 Hb_001085_230 Hb_000563_120--Hb_001085_230 Hb_009803_030 Hb_009803_030 Hb_000563_120--Hb_009803_030 Hb_167272_010 Hb_167272_010 Hb_007420_010--Hb_167272_010 Hb_000501_040 Hb_000501_040 Hb_007420_010--Hb_000501_040 Hb_007420_010--Hb_114310_050 Hb_007420_020 Hb_007420_020 Hb_007420_010--Hb_007420_020 Hb_007420_010--Hb_009803_030 Hb_001515_030 Hb_001515_030 Hb_007420_010--Hb_001515_030 Hb_011344_140 Hb_011344_140 Hb_001907_020--Hb_011344_140 Hb_022108_010 Hb_022108_010 Hb_001907_020--Hb_022108_010 Hb_004055_100 Hb_004055_100 Hb_001907_020--Hb_004055_100 Hb_026053_030 Hb_026053_030 Hb_001907_020--Hb_026053_030 Hb_002045_220 Hb_002045_220 Hb_001907_020--Hb_002045_220 Hb_001819_010 Hb_001819_010 Hb_123560_050--Hb_001819_010 Hb_003077_140 Hb_003077_140 Hb_123560_050--Hb_003077_140 Hb_123560_050--Hb_029866_110 Hb_123560_050--Hb_007420_020 Hb_026144_030 Hb_026144_030 Hb_123560_050--Hb_026144_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.498791 0.103081 0.118929 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.37146 0.293482

CAGE analysis