Hb_125961_010

Information

Type -
Description -
Location Contig125961: 2-823
Sequence    

Annotation

kegg
ID rcu:RCOM_0694460
description ATP binding protein, putative (EC:2.7.10.2)
nr
ID XP_002522182.1
description ATP binding protein, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S863
description ATP binding protein, putative OS=Ricinus communis GN=RCOM_0694460 PE=3 SV=1
Gene Ontology
ID GO:0004672
description probable receptor-like protein kinase at5g24010

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_125961_010 0.0 - - ATP binding protein, putative [Ricinus communis]
2 Hb_003226_230 0.0453146902 - - PREDICTED: transposon Ty3-G Gag-Pol polyprotein [Phoenix dactylifera]
3 Hb_162676_010 0.0509812578 - - ATP binding protein, putative [Ricinus communis]
4 Hb_000120_480 0.0708539011 - - -
5 Hb_005057_030 0.0716393286 - - Leucoanthocyanidin dioxygenase, putative [Ricinus communis]
6 Hb_008461_070 0.0723261445 - - PREDICTED: ethylene-overproduction protein 1 isoform X1 [Jatropha curcas]
7 Hb_066293_010 0.0735746852 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
8 Hb_005723_090 0.091447316 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002713_060 0.0976696267 - - PREDICTED: protein NRT1/ PTR FAMILY 6.4 [Jatropha curcas]
10 Hb_027337_130 0.1079082583 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Jatropha curcas]
11 Hb_169948_010 0.1135633372 - - hypothetical protein VITISV_006524 [Vitis vinifera]
12 Hb_002636_070 0.1139098036 - - PREDICTED: putative U-box domain-containing protein 42 [Jatropha curcas]
13 Hb_188075_010 0.1170217842 - - PREDICTED: uncharacterized protein LOC105775124 [Gossypium raimondii]
14 Hb_005183_100 0.1228120874 - - hypothetical protein CICLE_v10002898mg [Citrus clementina]
15 Hb_004204_220 0.1236176569 - - -
16 Hb_004934_130 0.1250629475 - - 12-oxophytodienoate reductase 2 isoform 1 [Theobroma cacao]
17 Hb_003858_060 0.1267091906 - - Germin-like protein subfamily 1 member 18 [Theobroma cacao]
18 Hb_001158_250 0.1271359743 - - conserved hypothetical protein [Ricinus communis]
19 Hb_089124_010 0.128184124 - - hypothetical protein POPTR_0018s09540g [Populus trichocarpa]
20 Hb_173387_010 0.1284930213 - - hypothetical protein POPTR_0017s13190g, partial [Populus trichocarpa]

Gene co-expression network

sample Hb_125961_010 Hb_125961_010 Hb_003226_230 Hb_003226_230 Hb_125961_010--Hb_003226_230 Hb_162676_010 Hb_162676_010 Hb_125961_010--Hb_162676_010 Hb_000120_480 Hb_000120_480 Hb_125961_010--Hb_000120_480 Hb_005057_030 Hb_005057_030 Hb_125961_010--Hb_005057_030 Hb_008461_070 Hb_008461_070 Hb_125961_010--Hb_008461_070 Hb_066293_010 Hb_066293_010 Hb_125961_010--Hb_066293_010 Hb_003226_230--Hb_162676_010 Hb_003226_230--Hb_000120_480 Hb_003226_230--Hb_005057_030 Hb_005723_090 Hb_005723_090 Hb_003226_230--Hb_005723_090 Hb_003226_230--Hb_066293_010 Hb_162676_010--Hb_000120_480 Hb_162676_010--Hb_005057_030 Hb_014700_030 Hb_014700_030 Hb_162676_010--Hb_014700_030 Hb_162676_010--Hb_008461_070 Hb_000120_480--Hb_005723_090 Hb_001158_250 Hb_001158_250 Hb_000120_480--Hb_001158_250 Hb_000120_480--Hb_005057_030 Hb_005057_030--Hb_005723_090 Hb_005183_100 Hb_005183_100 Hb_005057_030--Hb_005183_100 Hb_002713_060 Hb_002713_060 Hb_005057_030--Hb_002713_060 Hb_188075_010 Hb_188075_010 Hb_008461_070--Hb_188075_010 Hb_027337_130 Hb_027337_130 Hb_008461_070--Hb_027337_130 Hb_008461_070--Hb_003226_230 Hb_002636_070 Hb_002636_070 Hb_008461_070--Hb_002636_070 Hb_169948_010 Hb_169948_010 Hb_066293_010--Hb_169948_010 Hb_066293_010--Hb_000120_480 Hb_066293_010--Hb_162676_010 Hb_057880_020 Hb_057880_020 Hb_066293_010--Hb_057880_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 5.7398 4.38506 9.50398 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.5673 20.9185

CAGE analysis