Hb_066293_010

Information

Type -
Description -
Location Contig66293: 3-611
Sequence    

Annotation

kegg
ID rcu:RCOM_0586540
description receptor protein kinase, putative (EC:2.7.11.25 1.3.1.74)
nr
ID XP_012075835.1
description PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
swissprot
ID Q8VZG8
description Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=2 SV=3
trembl
ID A0A067KF04
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10566 PE=4 SV=1
Gene Ontology
ID GO:0016020
description probable lrr receptor-like serine threonine-protein kinase at4g08850

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_066293_010 0.0 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
2 Hb_125961_010 0.0735746852 - - ATP binding protein, putative [Ricinus communis]
3 Hb_003226_230 0.0877413985 - - PREDICTED: transposon Ty3-G Gag-Pol polyprotein [Phoenix dactylifera]
4 Hb_169948_010 0.0898545355 - - hypothetical protein VITISV_006524 [Vitis vinifera]
5 Hb_000120_480 0.0926883348 - - -
6 Hb_162676_010 0.0973157569 - - ATP binding protein, putative [Ricinus communis]
7 Hb_057880_020 0.1014270361 - - PREDICTED: receptor-like protein kinase HSL1, partial [Jatropha curcas]
8 Hb_004934_130 0.1068318831 - - 12-oxophytodienoate reductase 2 isoform 1 [Theobroma cacao]
9 Hb_002713_060 0.1086738424 - - PREDICTED: protein NRT1/ PTR FAMILY 6.4 [Jatropha curcas]
10 Hb_004979_080 0.1107186993 - - kinase, putative [Ricinus communis]
11 Hb_027337_130 0.1121546608 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Jatropha curcas]
12 Hb_005057_030 0.1140190377 - - Leucoanthocyanidin dioxygenase, putative [Ricinus communis]
13 Hb_000347_320 0.1156034989 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
14 Hb_002226_090 0.1166086818 - - Stachyose synthase precursor, putative [Ricinus communis]
15 Hb_173387_010 0.1192402522 - - hypothetical protein POPTR_0017s13190g, partial [Populus trichocarpa]
16 Hb_004979_070 0.1216949697 - - wall-associated receptor kinase galacturonan-binding protein [Medicago truncatula]
17 Hb_008461_070 0.123127401 - - PREDICTED: ethylene-overproduction protein 1 isoform X1 [Jatropha curcas]
18 Hb_000462_160 0.1237274535 - - UDP-glucosyltransferase, putative [Ricinus communis]
19 Hb_020367_040 0.1240802404 - - hypothetical protein JCGZ_01061 [Jatropha curcas]
20 Hb_004117_320 0.1250410224 - - PREDICTED: probable serine/threonine-protein kinase WNK5 [Jatropha curcas]

Gene co-expression network

sample Hb_066293_010 Hb_066293_010 Hb_125961_010 Hb_125961_010 Hb_066293_010--Hb_125961_010 Hb_003226_230 Hb_003226_230 Hb_066293_010--Hb_003226_230 Hb_169948_010 Hb_169948_010 Hb_066293_010--Hb_169948_010 Hb_000120_480 Hb_000120_480 Hb_066293_010--Hb_000120_480 Hb_162676_010 Hb_162676_010 Hb_066293_010--Hb_162676_010 Hb_057880_020 Hb_057880_020 Hb_066293_010--Hb_057880_020 Hb_125961_010--Hb_003226_230 Hb_125961_010--Hb_162676_010 Hb_125961_010--Hb_000120_480 Hb_005057_030 Hb_005057_030 Hb_125961_010--Hb_005057_030 Hb_008461_070 Hb_008461_070 Hb_125961_010--Hb_008461_070 Hb_003226_230--Hb_162676_010 Hb_003226_230--Hb_000120_480 Hb_003226_230--Hb_005057_030 Hb_005723_090 Hb_005723_090 Hb_003226_230--Hb_005723_090 Hb_169948_010--Hb_125961_010 Hb_004934_130 Hb_004934_130 Hb_169948_010--Hb_004934_130 Hb_169948_010--Hb_057880_020 Hb_000462_160 Hb_000462_160 Hb_169948_010--Hb_000462_160 Hb_027337_130 Hb_027337_130 Hb_169948_010--Hb_027337_130 Hb_000120_480--Hb_005723_090 Hb_000120_480--Hb_162676_010 Hb_001158_250 Hb_001158_250 Hb_000120_480--Hb_001158_250 Hb_000120_480--Hb_005057_030 Hb_162676_010--Hb_005057_030 Hb_014700_030 Hb_014700_030 Hb_162676_010--Hb_014700_030 Hb_162676_010--Hb_008461_070 Hb_057880_020--Hb_000462_160 Hb_020367_040 Hb_020367_040 Hb_057880_020--Hb_020367_040 Hb_002620_040 Hb_002620_040 Hb_057880_020--Hb_002620_040 Hb_000139_030 Hb_000139_030 Hb_057880_020--Hb_000139_030 Hb_048755_030 Hb_048755_030 Hb_057880_020--Hb_048755_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.506174 0.402968 0.808671 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.127228 2.25875

CAGE analysis