Hb_048755_030

Information

Type -
Description -
Location Contig48755: 22570-27972
Sequence    

Annotation

kegg
ID rcu:RCOM_1034300
description Periplasmic beta-glucosidase precursor, putative (EC:3.2.1.21)
nr
ID XP_002513892.1
description Periplasmic beta-glucosidase precursor, putative [Ricinus communis]
swissprot
ID Q9SGZ5
description Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana GN=BXL7 PE=2 SV=2
trembl
ID B9RJH3
description Periplasmic beta-glucosidase, putative OS=Ricinus communis GN=RCOM_1034300 PE=4 SV=1
Gene Ontology
ID GO:0009505
description probable beta-d-xylosidase 7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45078: 22875-27930
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_048755_030 0.0 - - Periplasmic beta-glucosidase precursor, putative [Ricinus communis]
2 Hb_000482_180 0.0648803827 - - PREDICTED: glycine dehydrogenase (decarboxylating), mitochondrial [Jatropha curcas]
3 Hb_011537_130 0.0906794003 - - unnamed protein product [Vitis vinifera]
4 Hb_001579_050 0.0906915572 - - alcohol dehydrogenase, putative [Ricinus communis]
5 Hb_002111_010 0.0910168979 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
6 Hb_000139_030 0.0915000899 - - PREDICTED: uncharacterized protein LOC101254423 [Solanum lycopersicum]
7 Hb_020367_040 0.0935692572 - - hypothetical protein JCGZ_01061 [Jatropha curcas]
8 Hb_000462_160 0.0953790119 - - UDP-glucosyltransferase, putative [Ricinus communis]
9 Hb_005675_030 0.0981547787 - - PREDICTED: 3-ketoacyl-CoA synthase 6 [Jatropha curcas]
10 Hb_003358_030 0.0981961923 - - ankyrin-kinase, putative [Ricinus communis]
11 Hb_004291_030 0.0989670825 - - PREDICTED: MATE efflux family protein 9-like [Jatropha curcas]
12 Hb_057880_020 0.0991982836 - - PREDICTED: receptor-like protein kinase HSL1, partial [Jatropha curcas]
13 Hb_000081_110 0.100927143 - - nitrate transporter, putative [Ricinus communis]
14 Hb_005111_040 0.1041221762 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
15 Hb_007904_110 0.1065356137 - - PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Populus euphratica]
16 Hb_000483_440 0.1073091889 - - conserved hypothetical protein [Ricinus communis]
17 Hb_004052_030 0.1075043568 - - PREDICTED: uncharacterized protein LOC105640637 [Jatropha curcas]
18 Hb_002534_090 0.1076258473 - - geranylgeranyl reductase [Hevea brasiliensis]
19 Hb_000199_090 0.1079947472 - - Tetrapyrrole-binding family protein [Populus trichocarpa]
20 Hb_002943_020 0.1084755465 - - hypothetical protein POPTR_0075s00240g, partial [Populus trichocarpa]

Gene co-expression network

sample Hb_048755_030 Hb_048755_030 Hb_000482_180 Hb_000482_180 Hb_048755_030--Hb_000482_180 Hb_011537_130 Hb_011537_130 Hb_048755_030--Hb_011537_130 Hb_001579_050 Hb_001579_050 Hb_048755_030--Hb_001579_050 Hb_002111_010 Hb_002111_010 Hb_048755_030--Hb_002111_010 Hb_000139_030 Hb_000139_030 Hb_048755_030--Hb_000139_030 Hb_020367_040 Hb_020367_040 Hb_048755_030--Hb_020367_040 Hb_005111_040 Hb_005111_040 Hb_000482_180--Hb_005111_040 Hb_002701_250 Hb_002701_250 Hb_000482_180--Hb_002701_250 Hb_007904_110 Hb_007904_110 Hb_000482_180--Hb_007904_110 Hb_006291_050 Hb_006291_050 Hb_000482_180--Hb_006291_050 Hb_005305_070 Hb_005305_070 Hb_000482_180--Hb_005305_070 Hb_005675_030 Hb_005675_030 Hb_011537_130--Hb_005675_030 Hb_018202_040 Hb_018202_040 Hb_011537_130--Hb_018202_040 Hb_002413_050 Hb_002413_050 Hb_011537_130--Hb_002413_050 Hb_002534_090 Hb_002534_090 Hb_011537_130--Hb_002534_090 Hb_169492_010 Hb_169492_010 Hb_011537_130--Hb_169492_010 Hb_002044_070 Hb_002044_070 Hb_011537_130--Hb_002044_070 Hb_001517_060 Hb_001517_060 Hb_001579_050--Hb_001517_060 Hb_015807_020 Hb_015807_020 Hb_001579_050--Hb_015807_020 Hb_001289_050 Hb_001289_050 Hb_001579_050--Hb_001289_050 Hb_001579_050--Hb_000139_030 Hb_000081_110 Hb_000081_110 Hb_001579_050--Hb_000081_110 Hb_001579_050--Hb_002534_090 Hb_000441_080 Hb_000441_080 Hb_002111_010--Hb_000441_080 Hb_077151_010 Hb_077151_010 Hb_002111_010--Hb_077151_010 Hb_000011_440 Hb_000011_440 Hb_002111_010--Hb_000011_440 Hb_002111_010--Hb_001579_050 Hb_002111_010--Hb_000139_030 Hb_000139_030--Hb_000081_110 Hb_057880_020 Hb_057880_020 Hb_000139_030--Hb_057880_020 Hb_000462_160 Hb_000462_160 Hb_000139_030--Hb_000462_160 Hb_000139_030--Hb_020367_040 Hb_002226_090 Hb_002226_090 Hb_020367_040--Hb_002226_090 Hb_020367_040--Hb_057880_020 Hb_020367_040--Hb_002701_250 Hb_020367_040--Hb_007904_110 Hb_020367_040--Hb_000081_110 Hb_000389_170 Hb_000389_170 Hb_020367_040--Hb_000389_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0577207 20.9658 66.5448 71.0355 0.135625 0.188262
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0154481 0 0 17.2238 296.798

CAGE analysis