Hb_002701_250

Information

Type -
Description -
Location Contig2701: 215256-228799
Sequence    

Annotation

kegg
ID pop:POPTR_0017s13240g
description hypothetical protein
nr
ID XP_012088049.1
description PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
swissprot
ID Q9SCZ4
description Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1
trembl
ID A0A067JNB6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25574 PE=3 SV=1
Gene Ontology
ID GO:0004674
description receptor-like protein kinase feronia

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28350: 217299-217427 , PASA_asmbl_28352: 217602-217853 , PASA_asmbl_28354: 221315-221469
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002701_250 0.0 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
2 Hb_000826_010 0.0516078601 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002289_070 0.0693671942 - - PREDICTED: magnesium-chelatase subunit ChlH, chloroplastic [Jatropha curcas]
4 Hb_000373_160 0.0755210959 - - PREDICTED: fructose-1,6-bisphosphatase, cytosolic [Jatropha curcas]
5 Hb_020367_040 0.076980433 - - hypothetical protein JCGZ_01061 [Jatropha curcas]
6 Hb_000098_040 0.0774200064 - - Ferredoxin-2, chloroplast precursor, putative [Ricinus communis]
7 Hb_000482_180 0.0775492254 - - PREDICTED: glycine dehydrogenase (decarboxylating), mitochondrial [Jatropha curcas]
8 Hb_014361_120 0.0781204842 - - PREDICTED: BTB/POZ domain-containing protein At5g67385 [Jatropha curcas]
9 Hb_007904_110 0.079284263 - - PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Populus euphratica]
10 Hb_000545_180 0.080019057 - - Photosystem II stability/assembly factor HCF136, chloroplast precursor, putative [Ricinus communis]
11 Hb_001269_030 0.0812065797 - - PREDICTED: pleiotropic drug resistance protein 1-like [Jatropha curcas]
12 Hb_009771_090 0.0819243697 - - -
13 Hb_005054_120 0.0841650965 - - PREDICTED: sedoheptulose-1,7-bisphosphatase, chloroplastic [Jatropha curcas]
14 Hb_002421_150 0.0844087222 - - hypothetical protein PRUPE_ppa020511mg [Prunus persica]
15 Hb_005305_070 0.0858099815 - - hypothetical protein POPTR_0001s26540g [Populus trichocarpa]
16 Hb_000352_230 0.0870693835 - - PREDICTED: glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic isoform X2 [Jatropha curcas]
17 Hb_002534_090 0.088245033 - - geranylgeranyl reductase [Hevea brasiliensis]
18 Hb_000081_110 0.0914099332 - - nitrate transporter, putative [Ricinus communis]
19 Hb_000906_080 0.0917103921 - - short chain alcohol dehydrogenase, putative [Ricinus communis]
20 Hb_119600_030 0.0922254372 - - PREDICTED: uncharacterized protein LOC105635187 [Jatropha curcas]

Gene co-expression network

sample Hb_002701_250 Hb_002701_250 Hb_000826_010 Hb_000826_010 Hb_002701_250--Hb_000826_010 Hb_002289_070 Hb_002289_070 Hb_002701_250--Hb_002289_070 Hb_000373_160 Hb_000373_160 Hb_002701_250--Hb_000373_160 Hb_020367_040 Hb_020367_040 Hb_002701_250--Hb_020367_040 Hb_000098_040 Hb_000098_040 Hb_002701_250--Hb_000098_040 Hb_000482_180 Hb_000482_180 Hb_002701_250--Hb_000482_180 Hb_002421_150 Hb_002421_150 Hb_000826_010--Hb_002421_150 Hb_009771_090 Hb_009771_090 Hb_000826_010--Hb_009771_090 Hb_000329_430 Hb_000329_430 Hb_000826_010--Hb_000329_430 Hb_000826_010--Hb_000098_040 Hb_001269_030 Hb_001269_030 Hb_000826_010--Hb_001269_030 Hb_002534_090 Hb_002534_090 Hb_002289_070--Hb_002534_090 Hb_014361_120 Hb_014361_120 Hb_002289_070--Hb_014361_120 Hb_001517_060 Hb_001517_060 Hb_002289_070--Hb_001517_060 Hb_011381_120 Hb_011381_120 Hb_002289_070--Hb_011381_120 Hb_009093_020 Hb_009093_020 Hb_002289_070--Hb_009093_020 Hb_005054_120 Hb_005054_120 Hb_000373_160--Hb_005054_120 Hb_000373_160--Hb_000826_010 Hb_000373_160--Hb_001269_030 Hb_031069_040 Hb_031069_040 Hb_000373_160--Hb_031069_040 Hb_000373_160--Hb_002421_150 Hb_002226_090 Hb_002226_090 Hb_020367_040--Hb_002226_090 Hb_057880_020 Hb_057880_020 Hb_020367_040--Hb_057880_020 Hb_007904_110 Hb_007904_110 Hb_020367_040--Hb_007904_110 Hb_000081_110 Hb_000081_110 Hb_020367_040--Hb_000081_110 Hb_000389_170 Hb_000389_170 Hb_020367_040--Hb_000389_170 Hb_000352_230 Hb_000352_230 Hb_000098_040--Hb_000352_230 Hb_000307_100 Hb_000307_100 Hb_000098_040--Hb_000307_100 Hb_001564_120 Hb_001564_120 Hb_000098_040--Hb_001564_120 Hb_000098_040--Hb_000329_430 Hb_000098_040--Hb_009771_090 Hb_002809_030 Hb_002809_030 Hb_000098_040--Hb_002809_030 Hb_005111_040 Hb_005111_040 Hb_000482_180--Hb_005111_040 Hb_048755_030 Hb_048755_030 Hb_000482_180--Hb_048755_030 Hb_000482_180--Hb_007904_110 Hb_006291_050 Hb_006291_050 Hb_000482_180--Hb_006291_050 Hb_005305_070 Hb_005305_070 Hb_000482_180--Hb_005305_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.71994 8.46334 5.81073 0 0.0142589
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0178503 0.00702399 0 0.311361 27.5478

CAGE analysis