Hb_002421_150

Information

Type -
Description -
Location Contig2421: 223742-241949
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa020511mg
description hypothetical protein
nr
ID XP_007213065.1
description hypothetical protein PRUPE_ppa020511mg [Prunus persica]
swissprot
ID -
description -
trembl
ID K4CMC7
description Uncharacterized protein OS=Solanum lycopersicum GN=Solyc08g069070.1 PE=4 SV=1
Gene Ontology
ID GO:0004672
description mitogen-activated protein kinase kinase kinase yoda-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002421_150 0.0 - - hypothetical protein PRUPE_ppa020511mg [Prunus persica]
2 Hb_000826_010 0.0485216593 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000373_160 0.0798659647 - - PREDICTED: fructose-1,6-bisphosphatase, cytosolic [Jatropha curcas]
4 Hb_002701_250 0.0844087222 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
5 Hb_000329_430 0.0861042199 transcription factor TF Family: bHLH PREDICTED: transcription factor UNE10 [Jatropha curcas]
6 Hb_003925_120 0.0898891473 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_26658 [Jatropha curcas]
7 Hb_001269_030 0.094539393 - - PREDICTED: pleiotropic drug resistance protein 1-like [Jatropha curcas]
8 Hb_002842_010 0.0946552464 - - sulfate transporter, putative [Ricinus communis]
9 Hb_000389_170 0.0947464239 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Jatropha curcas]
10 Hb_009771_090 0.0949111137 - - -
11 Hb_005054_120 0.0955233813 - - PREDICTED: sedoheptulose-1,7-bisphosphatase, chloroplastic [Jatropha curcas]
12 Hb_002400_260 0.0965989013 - - catalytic, putative [Ricinus communis]
13 Hb_000708_020 0.1007548745 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
14 Hb_000098_040 0.106941905 - - Ferredoxin-2, chloroplast precursor, putative [Ricinus communis]
15 Hb_009193_070 0.1071660156 - - fatty acid elongase 3-ketoacyl-CoA synthase 1 [Arabidopsis thaliana]
16 Hb_001699_110 0.1072491808 - - PREDICTED: pathogenesis-related protein 5-like [Jatropha curcas]
17 Hb_119600_030 0.1086973952 - - PREDICTED: uncharacterized protein LOC105635187 [Jatropha curcas]
18 Hb_002852_010 0.1115273694 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
19 Hb_020367_040 0.1122235673 - - hypothetical protein JCGZ_01061 [Jatropha curcas]
20 Hb_007904_110 0.1133163848 - - PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Populus euphratica]

Gene co-expression network

sample Hb_002421_150 Hb_002421_150 Hb_000826_010 Hb_000826_010 Hb_002421_150--Hb_000826_010 Hb_000373_160 Hb_000373_160 Hb_002421_150--Hb_000373_160 Hb_002701_250 Hb_002701_250 Hb_002421_150--Hb_002701_250 Hb_000329_430 Hb_000329_430 Hb_002421_150--Hb_000329_430 Hb_003925_120 Hb_003925_120 Hb_002421_150--Hb_003925_120 Hb_001269_030 Hb_001269_030 Hb_002421_150--Hb_001269_030 Hb_000826_010--Hb_002701_250 Hb_009771_090 Hb_009771_090 Hb_000826_010--Hb_009771_090 Hb_000826_010--Hb_000329_430 Hb_000098_040 Hb_000098_040 Hb_000826_010--Hb_000098_040 Hb_000826_010--Hb_001269_030 Hb_005054_120 Hb_005054_120 Hb_000373_160--Hb_005054_120 Hb_000373_160--Hb_002701_250 Hb_000373_160--Hb_000826_010 Hb_000373_160--Hb_001269_030 Hb_031069_040 Hb_031069_040 Hb_000373_160--Hb_031069_040 Hb_002289_070 Hb_002289_070 Hb_002701_250--Hb_002289_070 Hb_020367_040 Hb_020367_040 Hb_002701_250--Hb_020367_040 Hb_002701_250--Hb_000098_040 Hb_000482_180 Hb_000482_180 Hb_002701_250--Hb_000482_180 Hb_000307_100 Hb_000307_100 Hb_000329_430--Hb_000307_100 Hb_000329_430--Hb_000098_040 Hb_000329_430--Hb_009771_090 Hb_000329_430--Hb_003925_120 Hb_000352_230 Hb_000352_230 Hb_000329_430--Hb_000352_230 Hb_009193_070 Hb_009193_070 Hb_003925_120--Hb_009193_070 Hb_008847_050 Hb_008847_050 Hb_003925_120--Hb_008847_050 Hb_001141_100 Hb_001141_100 Hb_003925_120--Hb_001141_100 Hb_028491_010 Hb_028491_010 Hb_003925_120--Hb_028491_010 Hb_006615_090 Hb_006615_090 Hb_003925_120--Hb_006615_090 Hb_000545_180 Hb_000545_180 Hb_001269_030--Hb_000545_180 Hb_001892_080 Hb_001892_080 Hb_001269_030--Hb_001892_080 Hb_001269_030--Hb_009771_090 Hb_001028_040 Hb_001028_040 Hb_001269_030--Hb_001028_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00925801 0.0215244 0.020905 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0706694

CAGE analysis