Hb_005111_040

Information

Type -
Description -
Location Contig5111: 82417-87177
Sequence    

Annotation

kegg
ID rcu:RCOM_0347870
description glucose-6-phosphate 1-dehydrogenase, putative (EC:1.1.1.49)
nr
ID AIE47266.1
description glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
swissprot
ID O24357
description Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Spinacia oleracea GN=G6PD PE=2 SV=1
trembl
ID A0A068LLN2
description Glucose-6-phosphate 1-dehydrogenase OS=Hevea brasiliensis GN=G6PDH-1 PE=2 SV=1
Gene Ontology
ID GO:0009570
description glucose-6-phosphate 1- chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46334: 82476-87096 , PASA_asmbl_46335: 85631-86059
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005111_040 0.0 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
2 Hb_006291_050 0.0504752629 - - PREDICTED: polyribonucleotide nucleotidyltransferase 2, mitochondrial isoform X1 [Jatropha curcas]
3 Hb_000482_180 0.0551571577 - - PREDICTED: glycine dehydrogenase (decarboxylating), mitochondrial [Jatropha curcas]
4 Hb_001007_070 0.0659716554 - - thioredoxin m(mitochondrial)-type, putative [Ricinus communis]
5 Hb_009193_070 0.06597917 - - fatty acid elongase 3-ketoacyl-CoA synthase 1 [Arabidopsis thaliana]
6 Hb_131466_010 0.0686299251 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]
7 Hb_044478_010 0.0747000443 - - plastoquinol-plastocyanin reductase, putative [Ricinus communis]
8 Hb_005694_120 0.0747492917 - - PREDICTED: calcium-transporting ATPase, endoplasmic reticulum-type [Jatropha curcas]
9 Hb_001999_230 0.075241343 - - PREDICTED: uncharacterized protein LOC105630678 [Jatropha curcas]
10 Hb_001564_120 0.0786822217 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic [Populus euphratica]
11 Hb_001946_120 0.0788005325 - - PREDICTED: SPX domain-containing protein 1-like [Jatropha curcas]
12 Hb_002042_210 0.0799002671 - - PREDICTED: UPF0603 protein At1g54780, chloroplastic [Jatropha curcas]
13 Hb_153258_040 0.083620522 - - PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2-like [Jatropha curcas]
14 Hb_000099_120 0.0848665643 - - PREDICTED: GDT1-like protein 1, chloroplastic isoform X3 [Jatropha curcas]
15 Hb_011214_130 0.0848861052 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 86 [Jatropha curcas]
16 Hb_004052_030 0.0861379645 - - PREDICTED: uncharacterized protein LOC105640637 [Jatropha curcas]
17 Hb_005569_010 0.0879353345 - - Heme-binding protein, putative [Ricinus communis]
18 Hb_005054_120 0.0880780586 - - PREDICTED: sedoheptulose-1,7-bisphosphatase, chloroplastic [Jatropha curcas]
19 Hb_004128_170 0.08929996 - - hypothetical protein POPTR_0016s08350g [Populus trichocarpa]
20 Hb_000098_040 0.0905627874 - - Ferredoxin-2, chloroplast precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_005111_040 Hb_005111_040 Hb_006291_050 Hb_006291_050 Hb_005111_040--Hb_006291_050 Hb_000482_180 Hb_000482_180 Hb_005111_040--Hb_000482_180 Hb_001007_070 Hb_001007_070 Hb_005111_040--Hb_001007_070 Hb_009193_070 Hb_009193_070 Hb_005111_040--Hb_009193_070 Hb_131466_010 Hb_131466_010 Hb_005111_040--Hb_131466_010 Hb_044478_010 Hb_044478_010 Hb_005111_040--Hb_044478_010 Hb_006291_050--Hb_131466_010 Hb_006291_050--Hb_009193_070 Hb_002042_210 Hb_002042_210 Hb_006291_050--Hb_002042_210 Hb_006573_240 Hb_006573_240 Hb_006291_050--Hb_006573_240 Hb_006291_050--Hb_044478_010 Hb_048755_030 Hb_048755_030 Hb_000482_180--Hb_048755_030 Hb_002701_250 Hb_002701_250 Hb_000482_180--Hb_002701_250 Hb_007904_110 Hb_007904_110 Hb_000482_180--Hb_007904_110 Hb_000482_180--Hb_006291_050 Hb_005305_070 Hb_005305_070 Hb_000482_180--Hb_005305_070 Hb_001999_230 Hb_001999_230 Hb_001007_070--Hb_001999_230 Hb_000099_120 Hb_000099_120 Hb_001007_070--Hb_000099_120 Hb_005054_120 Hb_005054_120 Hb_001007_070--Hb_005054_120 Hb_002259_090 Hb_002259_090 Hb_001007_070--Hb_002259_090 Hb_001007_070--Hb_009193_070 Hb_000254_130 Hb_000254_130 Hb_001007_070--Hb_000254_130 Hb_003925_120 Hb_003925_120 Hb_009193_070--Hb_003925_120 Hb_008847_050 Hb_008847_050 Hb_009193_070--Hb_008847_050 Hb_028491_010 Hb_028491_010 Hb_009193_070--Hb_028491_010 Hb_009193_070--Hb_001999_230 Hb_029991_010 Hb_029991_010 Hb_131466_010--Hb_029991_010 Hb_131466_010--Hb_009193_070 Hb_004607_110 Hb_004607_110 Hb_131466_010--Hb_004607_110 Hb_131466_010--Hb_002042_210 Hb_131466_010--Hb_028491_010 Hb_153258_040 Hb_153258_040 Hb_044478_010--Hb_153258_040 Hb_044478_010--Hb_002042_210 Hb_044478_010--Hb_131466_010 Hb_001946_120 Hb_001946_120 Hb_044478_010--Hb_001946_120 Hb_044478_010--Hb_001999_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.29438 23.0288 21.7468 0.00854656 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.062218 0.0326375 0 1.98527 62.7989

CAGE analysis