Hb_131466_010

Information

Type -
Description -
Location Contig131466: 6968-7993
Sequence    

Annotation

kegg
ID rcu:RCOM_0739230
description amidase, putative (EC:3.5.1.4)
nr
ID XP_012084367.1
description PREDICTED: putative amidase C869.01 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K5N3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19575 PE=4 SV=1
Gene Ontology
ID GO:0004040
description amidase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_131466_010 0.0 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]
2 Hb_029991_010 0.0460599131 - - hypothetical protein PRUPE_ppa001615mg [Prunus persica]
3 Hb_006291_050 0.0516665117 - - PREDICTED: polyribonucleotide nucleotidyltransferase 2, mitochondrial isoform X1 [Jatropha curcas]
4 Hb_009193_070 0.0629268162 - - fatty acid elongase 3-ketoacyl-CoA synthase 1 [Arabidopsis thaliana]
5 Hb_004607_110 0.0633193746 - - PREDICTED: serine/threonine-protein kinase Nek6 [Jatropha curcas]
6 Hb_002042_210 0.0644364076 - - PREDICTED: UPF0603 protein At1g54780, chloroplastic [Jatropha curcas]
7 Hb_028491_010 0.0648090473 - - hypothetical protein JCGZ_12857 [Jatropha curcas]
8 Hb_044478_010 0.0683129318 - - plastoquinol-plastocyanin reductase, putative [Ricinus communis]
9 Hb_005111_040 0.0686299251 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
10 Hb_001999_230 0.0686847013 - - PREDICTED: uncharacterized protein LOC105630678 [Jatropha curcas]
11 Hb_006573_240 0.0763103014 - - PREDICTED: anthocyanidin 5,3-O-glucosyltransferase-like [Jatropha curcas]
12 Hb_003033_020 0.0767439212 - - PREDICTED: glucomannan 4-beta-mannosyltransferase 9-like [Jatropha curcas]
13 Hb_000497_050 0.0783884247 - - PREDICTED: photosystem II repair protein PSB27-H1, chloroplastic [Jatropha curcas]
14 Hb_008195_090 0.0787169282 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001307_050 0.0787588041 - - PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Jatropha curcas]
16 Hb_001735_040 0.079893274 - - PREDICTED: F-box protein SKIP2-like isoform X2 [Populus euphratica]
17 Hb_002121_050 0.0799426778 - - hypothetical protein EUGRSUZ_D02586 [Eucalyptus grandis]
18 Hb_001007_070 0.081841707 - - thioredoxin m(mitochondrial)-type, putative [Ricinus communis]
19 Hb_001564_120 0.0821563521 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic [Populus euphratica]
20 Hb_000392_470 0.0822471814 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_131466_010 Hb_131466_010 Hb_029991_010 Hb_029991_010 Hb_131466_010--Hb_029991_010 Hb_006291_050 Hb_006291_050 Hb_131466_010--Hb_006291_050 Hb_009193_070 Hb_009193_070 Hb_131466_010--Hb_009193_070 Hb_004607_110 Hb_004607_110 Hb_131466_010--Hb_004607_110 Hb_002042_210 Hb_002042_210 Hb_131466_010--Hb_002042_210 Hb_028491_010 Hb_028491_010 Hb_131466_010--Hb_028491_010 Hb_029991_010--Hb_004607_110 Hb_001307_050 Hb_001307_050 Hb_029991_010--Hb_001307_050 Hb_029991_010--Hb_028491_010 Hb_000179_010 Hb_000179_010 Hb_029991_010--Hb_000179_010 Hb_000497_050 Hb_000497_050 Hb_029991_010--Hb_000497_050 Hb_005111_040 Hb_005111_040 Hb_006291_050--Hb_005111_040 Hb_006291_050--Hb_009193_070 Hb_006291_050--Hb_002042_210 Hb_006573_240 Hb_006573_240 Hb_006291_050--Hb_006573_240 Hb_044478_010 Hb_044478_010 Hb_006291_050--Hb_044478_010 Hb_003925_120 Hb_003925_120 Hb_009193_070--Hb_003925_120 Hb_008847_050 Hb_008847_050 Hb_009193_070--Hb_008847_050 Hb_001007_070 Hb_001007_070 Hb_009193_070--Hb_001007_070 Hb_009193_070--Hb_028491_010 Hb_001999_230 Hb_001999_230 Hb_009193_070--Hb_001999_230 Hb_004607_110--Hb_028491_010 Hb_001141_100 Hb_001141_100 Hb_004607_110--Hb_001141_100 Hb_001735_040 Hb_001735_040 Hb_004607_110--Hb_001735_040 Hb_000803_080 Hb_000803_080 Hb_004607_110--Hb_000803_080 Hb_002042_210--Hb_044478_010 Hb_002805_280 Hb_002805_280 Hb_002042_210--Hb_002805_280 Hb_003033_020 Hb_003033_020 Hb_002042_210--Hb_003033_020 Hb_002042_210--Hb_005111_040 Hb_028491_010--Hb_001141_100 Hb_001277_130 Hb_001277_130 Hb_028491_010--Hb_001277_130 Hb_028491_010--Hb_008847_050 Hb_147028_010 Hb_147028_010 Hb_028491_010--Hb_147028_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.108442 1.51739 1.41979 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0789282 3.82917

CAGE analysis