Hb_018202_040

Information

Type -
Description -
Location Contig18202: 30718-33672
Sequence    

Annotation

kegg
ID pop:POPTR_0001s35130g
description POPTRDRAFT_173892; hypothetical protein
nr
ID XP_012072520.1
description PREDICTED: phosphoenolpyruvate/phosphate translocator 2, chloroplastic-like [Jatropha curcas]
swissprot
ID Q8H0T6
description Phosphoenolpyruvate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=PPT2 PE=2 SV=1
trembl
ID A0A067LPI4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10279 PE=4 SV=1
Gene Ontology
ID GO:0016021
description phosphoenolpyruvate phosphate translocator chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17715: 31801-33189
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_018202_040 0.0 - - PREDICTED: phosphoenolpyruvate/phosphate translocator 2, chloroplastic-like [Jatropha curcas]
2 Hb_011537_130 0.0568467712 - - unnamed protein product [Vitis vinifera]
3 Hb_005675_030 0.0640352055 - - PREDICTED: 3-ketoacyl-CoA synthase 6 [Jatropha curcas]
4 Hb_169492_010 0.0696304886 - - PREDICTED: expansin-like B1 [Jatropha curcas]
5 Hb_002413_050 0.0718733349 - - hypothetical protein POPTR_0018s06150g [Populus trichocarpa]
6 Hb_010021_040 0.0801935502 - - PREDICTED: uncharacterized protein LOC105630811 [Jatropha curcas]
7 Hb_000883_080 0.0831623455 - - ankyrin repeat-containing protein, putative [Ricinus communis]
8 Hb_018487_040 0.0843819719 - - PREDICTED: 3-ketoacyl-CoA synthase 6 [Jatropha curcas]
9 Hb_080048_030 0.0864721304 desease resistance Gene Name: NB-ARC Leucine-rich repeat containing protein [Theobroma cacao]
10 Hb_000928_260 0.0875308614 - - hypothetical protein POPTR_0019s06080g [Populus trichocarpa]
11 Hb_004143_080 0.0915454806 - - PREDICTED: protein ECERIFERUM 1 [Jatropha curcas]
12 Hb_005483_040 0.0930286994 - - PREDICTED: mechanosensitive ion channel protein 10-like [Jatropha curcas]
13 Hb_000815_120 0.0940258251 - - calcium ion binding protein, putative [Ricinus communis]
14 Hb_002044_070 0.0957048547 - - Chlorophyll a-b binding protein 3, chloroplastic [Theobroma cacao]
15 Hb_001951_050 0.0965628577 - - chlorophyll A/B binding protein, putative [Ricinus communis]
16 Hb_002534_090 0.0969286296 - - geranylgeranyl reductase [Hevea brasiliensis]
17 Hb_002329_050 0.098086881 - - conserved hypothetical protein [Ricinus communis]
18 Hb_002301_070 0.1003192337 - - PREDICTED: triose phosphate/phosphate translocator TPT, chloroplastic isoform X1 [Jatropha curcas]
19 Hb_006718_030 0.1006567515 - - ATPase, F1 complex, gamma subunit protein [Theobroma cacao]
20 Hb_022832_050 0.101213419 - - PREDICTED: protein argonaute 16 isoform X1 [Sesamum indicum]

Gene co-expression network

sample Hb_018202_040 Hb_018202_040 Hb_011537_130 Hb_011537_130 Hb_018202_040--Hb_011537_130 Hb_005675_030 Hb_005675_030 Hb_018202_040--Hb_005675_030 Hb_169492_010 Hb_169492_010 Hb_018202_040--Hb_169492_010 Hb_002413_050 Hb_002413_050 Hb_018202_040--Hb_002413_050 Hb_010021_040 Hb_010021_040 Hb_018202_040--Hb_010021_040 Hb_000883_080 Hb_000883_080 Hb_018202_040--Hb_000883_080 Hb_011537_130--Hb_005675_030 Hb_011537_130--Hb_002413_050 Hb_002534_090 Hb_002534_090 Hb_011537_130--Hb_002534_090 Hb_011537_130--Hb_169492_010 Hb_002044_070 Hb_002044_070 Hb_011537_130--Hb_002044_070 Hb_001488_160 Hb_001488_160 Hb_005675_030--Hb_001488_160 Hb_080048_030 Hb_080048_030 Hb_005675_030--Hb_080048_030 Hb_018487_040 Hb_018487_040 Hb_005675_030--Hb_018487_040 Hb_005675_030--Hb_169492_010 Hb_169492_010--Hb_080048_030 Hb_169492_010--Hb_018487_040 Hb_001951_050 Hb_001951_050 Hb_169492_010--Hb_001951_050 Hb_002413_050--Hb_002534_090 Hb_002413_050--Hb_002044_070 Hb_029622_060 Hb_029622_060 Hb_002413_050--Hb_029622_060 Hb_002413_050--Hb_005675_030 Hb_008864_050 Hb_008864_050 Hb_010021_040--Hb_008864_050 Hb_001775_010 Hb_001775_010 Hb_010021_040--Hb_001775_010 Hb_000768_080 Hb_000768_080 Hb_010021_040--Hb_000768_080 Hb_004920_080 Hb_004920_080 Hb_010021_040--Hb_004920_080 Hb_005194_050 Hb_005194_050 Hb_010021_040--Hb_005194_050 Hb_002329_050 Hb_002329_050 Hb_000883_080--Hb_002329_050 Hb_000928_260 Hb_000928_260 Hb_000883_080--Hb_000928_260 Hb_011362_010 Hb_011362_010 Hb_000883_080--Hb_011362_010 Hb_005483_040 Hb_005483_040 Hb_000883_080--Hb_005483_040 Hb_000883_080--Hb_018487_040 Hb_006718_030 Hb_006718_030 Hb_000883_080--Hb_006718_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0916578 1.32222 4.92992 7.60076 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.131576 32.3281

CAGE analysis