Hb_004374_090

Information

Type transcription factor
Description TF Family: HB
Location Contig4374: 90272-94710
Sequence    

Annotation

kegg
ID rcu:RCOM_1687910
description bel1 homeotic protein, putative
nr
ID XP_011029331.1
description PREDICTED: homeobox protein BEL1 homolog [Populus euphratica]
swissprot
ID Q38897
description Homeobox protein BEL1 homolog OS=Arabidopsis thaliana GN=BEL1 PE=1 SV=2
trembl
ID B9RCF9
description Bel1 homeotic protein, putative OS=Ricinus communis GN=RCOM_1687910 PE=4 SV=1
Gene Ontology
ID GO:0005634
description homeobox protein bel1 homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42499: 92415-93619 , PASA_asmbl_42500: 93696-94495
cDNA
(Sanger)
(ID:Location)		 014_A16.ab1: 90433-90700

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004374_090 0.0 transcription factor TF Family: HB PREDICTED: homeobox protein BEL1 homolog [Populus euphratica]
2 Hb_023738_010 0.1044322741 - - Concanavalin A-like lectin protein kinase family protein [Theobroma cacao]
3 Hb_007201_010 0.1122130226 - - PREDICTED: uncharacterized protein LOC105631226 isoform X2 [Jatropha curcas]
4 Hb_168319_040 0.1135145669 - - PREDICTED: cytochrome P450 CYP749A22-like [Jatropha curcas]
5 Hb_034168_010 0.1268049569 - - hypothetical protein [Azospirillum sp. CAG:260]
6 Hb_093388_010 0.1393940197 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
7 Hb_005678_030 0.1413649788 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
8 Hb_000441_080 0.1466654021 - - calmodulin binding protein, putative [Ricinus communis]
9 Hb_001383_080 0.1538516362 - - OSJNBa0019D11.8 [Oryza sativa Japonica Group]
10 Hb_139365_010 0.1544840219 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
11 Hb_003302_010 0.1546167501 - - PREDICTED: alpha-dioxygenase 1 [Jatropha curcas]
12 Hb_003540_170 0.1551001235 - - PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Jatropha curcas]
13 Hb_000139_030 0.155370444 - - PREDICTED: uncharacterized protein LOC101254423 [Solanum lycopersicum]
14 Hb_003414_040 0.1564415603 - - hypothetical protein VITISV_016691 [Vitis vinifera]
15 Hb_000360_010 0.1565888445 - - PREDICTED: ferredoxin-dependent glutamate synthase, chloroplastic isoform X1 [Jatropha curcas]
16 Hb_029510_060 0.1572450751 - - PREDICTED: probable plastidic glucose transporter 3 [Jatropha curcas]
17 Hb_001793_040 0.1602831666 - - hypothetical protein VITISV_006810 [Vitis vinifera]
18 Hb_010080_070 0.1606600385 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH, chloroplastic [Jatropha curcas]
19 Hb_011649_030 0.1609078554 - - hypothetical protein [Vitis hybrid cultivar]
20 Hb_012528_040 0.1622915581 - - -

Gene co-expression network

sample Hb_004374_090 Hb_004374_090 Hb_023738_010 Hb_023738_010 Hb_004374_090--Hb_023738_010 Hb_007201_010 Hb_007201_010 Hb_004374_090--Hb_007201_010 Hb_168319_040 Hb_168319_040 Hb_004374_090--Hb_168319_040 Hb_034168_010 Hb_034168_010 Hb_004374_090--Hb_034168_010 Hb_093388_010 Hb_093388_010 Hb_004374_090--Hb_093388_010 Hb_005678_030 Hb_005678_030 Hb_004374_090--Hb_005678_030 Hb_029510_060 Hb_029510_060 Hb_023738_010--Hb_029510_060 Hb_023738_010--Hb_093388_010 Hb_001250_030 Hb_001250_030 Hb_023738_010--Hb_001250_030 Hb_003302_010 Hb_003302_010 Hb_023738_010--Hb_003302_010 Hb_000441_080 Hb_000441_080 Hb_023738_010--Hb_000441_080 Hb_003944_010 Hb_003944_010 Hb_007201_010--Hb_003944_010 Hb_003905_030 Hb_003905_030 Hb_007201_010--Hb_003905_030 Hb_000360_010 Hb_000360_010 Hb_007201_010--Hb_000360_010 Hb_010080_070 Hb_010080_070 Hb_007201_010--Hb_010080_070 Hb_001081_050 Hb_001081_050 Hb_007201_010--Hb_001081_050 Hb_168319_040--Hb_000441_080 Hb_077151_010 Hb_077151_010 Hb_168319_040--Hb_077151_010 Hb_001579_050 Hb_001579_050 Hb_168319_040--Hb_001579_050 Hb_001691_170 Hb_001691_170 Hb_168319_040--Hb_001691_170 Hb_000858_050 Hb_000858_050 Hb_168319_040--Hb_000858_050 Hb_168319_040--Hb_005678_030 Hb_000920_020 Hb_000920_020 Hb_034168_010--Hb_000920_020 Hb_189099_020 Hb_189099_020 Hb_034168_010--Hb_189099_020 Hb_062192_020 Hb_062192_020 Hb_034168_010--Hb_062192_020 Hb_002551_030 Hb_002551_030 Hb_034168_010--Hb_002551_030 Hb_062192_030 Hb_062192_030 Hb_034168_010--Hb_062192_030 Hb_093388_010--Hb_001250_030 Hb_093388_010--Hb_029510_060 Hb_000432_020 Hb_000432_020 Hb_093388_010--Hb_000432_020 Hb_003414_040 Hb_003414_040 Hb_093388_010--Hb_003414_040 Hb_093388_010--Hb_005678_030 Hb_000135_080 Hb_000135_080 Hb_005678_030--Hb_000135_080 Hb_005678_030--Hb_077151_010 Hb_000476_030 Hb_000476_030 Hb_005678_030--Hb_000476_030 Hb_006455_020 Hb_006455_020 Hb_005678_030--Hb_006455_020 Hb_005678_030--Hb_000441_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.7164 8.02298 9.4354 3.37154 0.0308094 0.436446
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.200656 0.0451146 0.561061 4.04817 72.3277

CAGE analysis