Hb_000135_080

Information

Type -
Description -
Location Contig135: 117225-128946
Sequence    

Annotation

kegg
ID rcu:RCOM_1486930
description Flavonol synthase/flavanone 3-hydroxylase, putative (EC:1.14.11.23)
nr
ID XP_002515914.1
description Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
swissprot
ID Q945B6
description Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 OS=Arabidopsis thaliana GN=AOP1.2 PE=2 SV=1
trembl
ID B9RQ95
description Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis GN=RCOM_1486930 PE=3 SV=1
Gene Ontology
ID GO:0045431
description probable 2-oxoglutarate-dependent dioxygenase aop1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000135_080 0.0 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
2 Hb_000476_030 0.0550878346 - - PREDICTED: uncharacterized protein LOC105629366 [Jatropha curcas]
3 Hb_005678_030 0.0723697326 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
4 Hb_001001_130 0.0943853907 - - hypothetical protein POPTR_0002s12860g [Populus trichocarpa]
5 Hb_001856_290 0.103640502 - - hypothetical protein JCGZ_16255 [Jatropha curcas]
6 Hb_012528_040 0.1040353873 - - -
7 Hb_000858_050 0.1090643152 - - kinase, putative [Ricinus communis]
8 Hb_005029_030 0.1110315953 - - PREDICTED: LOW QUALITY PROTEIN: 36.4 kDa proline-rich protein-like [Sesamum indicum]
9 Hb_000522_030 0.1133325464 - - hypothetical protein VITISV_006017 [Vitis vinifera]
10 Hb_077151_010 0.1161048027 - - ankyrin repeat protein [Bruguiera gymnorhiza]
11 Hb_007101_090 0.1214324752 - - PREDICTED: protein ALTERED XYLOGLUCAN 4 [Jatropha curcas]
12 Hb_052139_010 0.1233688166 - - PREDICTED: glucan endo-1,3-beta-glucosidase, basic isoform-like [Populus euphratica]
13 Hb_015807_020 0.125524854 - - gibberellin 20-oxidase, putative [Ricinus communis]
14 Hb_168319_040 0.1263947242 - - PREDICTED: cytochrome P450 CYP749A22-like [Jatropha curcas]
15 Hb_006455_020 0.1275184369 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
16 Hb_007533_050 0.138282577 - - -
17 Hb_014109_020 0.1387467962 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 53 [Jatropha curcas]
18 Hb_032733_030 0.1410726944 - - hypothetical protein CISIN_1g048657mg, partial [Citrus sinensis]
19 Hb_057716_010 0.143396634 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
20 Hb_000432_020 0.1487655823 desease resistance Gene Name: Tropomyosin_1 PREDICTED: putative disease resistance protein RGA1 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000135_080 Hb_000135_080 Hb_000476_030 Hb_000476_030 Hb_000135_080--Hb_000476_030 Hb_005678_030 Hb_005678_030 Hb_000135_080--Hb_005678_030 Hb_001001_130 Hb_001001_130 Hb_000135_080--Hb_001001_130 Hb_001856_290 Hb_001856_290 Hb_000135_080--Hb_001856_290 Hb_012528_040 Hb_012528_040 Hb_000135_080--Hb_012528_040 Hb_000858_050 Hb_000858_050 Hb_000135_080--Hb_000858_050 Hb_000476_030--Hb_005678_030 Hb_000522_030 Hb_000522_030 Hb_000476_030--Hb_000522_030 Hb_006455_020 Hb_006455_020 Hb_000476_030--Hb_006455_020 Hb_005029_030 Hb_005029_030 Hb_000476_030--Hb_005029_030 Hb_000476_030--Hb_000858_050 Hb_077151_010 Hb_077151_010 Hb_005678_030--Hb_077151_010 Hb_168319_040 Hb_168319_040 Hb_005678_030--Hb_168319_040 Hb_005678_030--Hb_006455_020 Hb_000441_080 Hb_000441_080 Hb_005678_030--Hb_000441_080 Hb_007101_090 Hb_007101_090 Hb_001001_130--Hb_007101_090 Hb_052139_010 Hb_052139_010 Hb_001001_130--Hb_052139_010 Hb_001001_130--Hb_001856_290 Hb_001001_130--Hb_012528_040 Hb_001001_130--Hb_000858_050 Hb_001856_290--Hb_052139_010 Hb_001856_290--Hb_007101_090 Hb_057716_010 Hb_057716_010 Hb_001856_290--Hb_057716_010 Hb_054865_040 Hb_054865_040 Hb_001856_290--Hb_054865_040 Hb_031194_020 Hb_031194_020 Hb_001856_290--Hb_031194_020 Hb_161881_010 Hb_161881_010 Hb_012528_040--Hb_161881_010 Hb_000123_070 Hb_000123_070 Hb_012528_040--Hb_000123_070 Hb_002010_010 Hb_002010_010 Hb_012528_040--Hb_002010_010 Hb_014109_020 Hb_014109_020 Hb_012528_040--Hb_014109_020 Hb_015807_020 Hb_015807_020 Hb_000858_050--Hb_015807_020 Hb_000282_100 Hb_000282_100 Hb_000858_050--Hb_000282_100 Hb_000026_060 Hb_000026_060 Hb_000858_050--Hb_000026_060 Hb_004146_030 Hb_004146_030 Hb_000858_050--Hb_004146_030 Hb_000858_050--Hb_005029_030 Hb_001289_050 Hb_001289_050 Hb_000858_050--Hb_001289_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00797784 0.0855186 0.443207 0.149397 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.339567 4.05659

CAGE analysis