Hb_002010_010

Information

Type -
Description -
Location Contig2010: 707-3007
Sequence    

Annotation

kegg
ID pop:POPTR_0006s00890g
description hypothetical protein
nr
ID AFD61601.1
description anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
swissprot
ID Q40285
description Anthocyanidin 3-O-glucosyltransferase 2 (Fragment) OS=Manihot esculenta GN=GT2 PE=2 SV=1
trembl
ID H9BMN5
description Anthocyanidin 3-O-glucosyltransferase OS=Hevea brasiliensis GN=ANGT1 PE=2 SV=1
Gene Ontology
ID GO:0047213
description anthocyanidin 3-o-glucosyltransferase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002010_010 0.0 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
2 Hb_161881_010 0.065892909 - - laccase, putative [Ricinus communis]
3 Hb_003732_030 0.0688955621 - - gibberellin 20-oxidase, putative [Ricinus communis]
4 Hb_007101_090 0.0801453449 - - PREDICTED: protein ALTERED XYLOGLUCAN 4 [Jatropha curcas]
5 Hb_000336_130 0.0811731573 - - Triacylglycerol lipase 2 precursor, putative [Ricinus communis]
6 Hb_001999_330 0.084086519 - - hypothetical protein PRUPE_ppa022262mg, partial [Prunus persica]
7 Hb_004030_010 0.0848888262 - - hypothetical protein CICLE_v10013050mg [Citrus clementina]
8 Hb_003947_020 0.0897767251 - - Serine/threonine-protein kinase-transforming protein raf, putative [Ricinus communis]
9 Hb_000776_120 0.0903347743 - - PREDICTED: cytochrome P450 78A5 [Jatropha curcas]
10 Hb_000922_110 0.0957631519 transcription factor TF Family: MYB PREDICTED: transcription factor WER-like [Jatropha curcas]
11 Hb_005194_050 0.0963308449 transcription factor TF Family: GRAS SCL domain class transcription factor [Theobroma cacao]
12 Hb_012528_040 0.0990008632 - - -
13 Hb_000123_070 0.1022330449 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
14 Hb_063885_010 0.1025247113 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
15 Hb_001775_010 0.1033249367 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001610_100 0.1042901237 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
17 Hb_001001_130 0.1052358093 - - hypothetical protein POPTR_0002s12860g [Populus trichocarpa]
18 Hb_171685_070 0.1086279801 - - -
19 Hb_011689_070 0.1111314074 - - PREDICTED: pyruvate, phosphate dikinase, chloroplastic [Jatropha curcas]
20 Hb_000349_150 0.1114890676 - - PREDICTED: geraniol 8-hydroxylase-like [Jatropha curcas]

Gene co-expression network

sample Hb_002010_010 Hb_002010_010 Hb_161881_010 Hb_161881_010 Hb_002010_010--Hb_161881_010 Hb_003732_030 Hb_003732_030 Hb_002010_010--Hb_003732_030 Hb_007101_090 Hb_007101_090 Hb_002010_010--Hb_007101_090 Hb_000336_130 Hb_000336_130 Hb_002010_010--Hb_000336_130 Hb_001999_330 Hb_001999_330 Hb_002010_010--Hb_001999_330 Hb_004030_010 Hb_004030_010 Hb_002010_010--Hb_004030_010 Hb_012528_040 Hb_012528_040 Hb_161881_010--Hb_012528_040 Hb_000123_070 Hb_000123_070 Hb_161881_010--Hb_000123_070 Hb_000922_110 Hb_000922_110 Hb_161881_010--Hb_000922_110 Hb_161881_010--Hb_003732_030 Hb_161881_010--Hb_004030_010 Hb_003732_030--Hb_004030_010 Hb_011689_070 Hb_011689_070 Hb_003732_030--Hb_011689_070 Hb_000776_120 Hb_000776_120 Hb_003732_030--Hb_000776_120 Hb_001775_010 Hb_001775_010 Hb_003732_030--Hb_001775_010 Hb_003732_030--Hb_000922_110 Hb_001001_130 Hb_001001_130 Hb_007101_090--Hb_001001_130 Hb_052139_010 Hb_052139_010 Hb_007101_090--Hb_052139_010 Hb_000645_270 Hb_000645_270 Hb_007101_090--Hb_000645_270 Hb_001856_290 Hb_001856_290 Hb_007101_090--Hb_001856_290 Hb_007101_090--Hb_001999_330 Hb_000336_130--Hb_001999_330 Hb_026188_010 Hb_026188_010 Hb_000336_130--Hb_026188_010 Hb_171685_070 Hb_171685_070 Hb_000336_130--Hb_171685_070 Hb_063885_010 Hb_063885_010 Hb_000336_130--Hb_063885_010 Hb_000336_130--Hb_007101_090 Hb_001999_330--Hb_000645_270 Hb_000844_060 Hb_000844_060 Hb_001999_330--Hb_000844_060 Hb_009095_020 Hb_009095_020 Hb_001999_330--Hb_009095_020 Hb_004030_010--Hb_000776_120 Hb_004030_010--Hb_011689_070 Hb_008864_050 Hb_008864_050 Hb_004030_010--Hb_008864_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.535014 1.21169 1.20045 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.208943 19.8062

CAGE analysis