Hb_029510_060

Information

Type -
Description -
Location Contig29510: 30461-44647
Sequence    

Annotation

kegg
ID pop:POPTR_0001s18590g
description POPTRDRAFT_705740; hexose transporter family protein
nr
ID XP_012073379.1
description PREDICTED: probable plastidic glucose transporter 3 [Jatropha curcas]
swissprot
ID Q2V4B9
description Probable plastidic glucose transporter 3 OS=Arabidopsis thaliana GN=At1g79820 PE=2 SV=2
trembl
ID A0A067KZK9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06310 PE=3 SV=1
Gene Ontology
ID GO:0016021
description probable plastidic glucose transporter 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30862: 30132-30555
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_029510_060 0.0 - - PREDICTED: probable plastidic glucose transporter 3 [Jatropha curcas]
2 Hb_023738_010 0.091164889 - - Concanavalin A-like lectin protein kinase family protein [Theobroma cacao]
3 Hb_093388_010 0.094931017 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
4 Hb_119832_010 0.1062343994 - - -
5 Hb_001250_030 0.113187424 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000951_070 0.1208585172 - - PREDICTED: LOW QUALITY PROTEIN: receptor-like protein kinase FERONIA [Populus euphratica]
7 Hb_003796_010 0.125937251 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
8 Hb_003440_080 0.129944517 - - polyprotein [Citrus endogenous pararetrovirus]
9 Hb_012796_030 0.1302108068 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
10 Hb_149345_010 0.1397367699 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
11 Hb_089305_040 0.1415457988 - - -
12 Hb_001300_090 0.1429152696 - - PREDICTED: glutaredoxin-C11 [Jatropha curcas]
13 Hb_004951_030 0.1437485582 - - 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]
14 Hb_004643_020 0.1453174218 - - hypothetical protein AMTR_s05716p00004100, partial [Amborella trichopoda]
15 Hb_010402_040 0.1462199261 - - hypothetical protein JCGZ_21227 [Jatropha curcas]
16 Hb_000289_090 0.1525042712 - - -
17 Hb_000672_130 0.1534910588 - - hypothetical protein POPTR_0010s22870g [Populus trichocarpa]
18 Hb_004899_210 0.1540310073 - - PREDICTED: respiratory burst oxidase homolog protein E [Jatropha curcas]
19 Hb_005194_050 0.1552418788 transcription factor TF Family: GRAS SCL domain class transcription factor [Theobroma cacao]
20 Hb_057880_020 0.1554899489 - - PREDICTED: receptor-like protein kinase HSL1, partial [Jatropha curcas]

Gene co-expression network

sample Hb_029510_060 Hb_029510_060 Hb_023738_010 Hb_023738_010 Hb_029510_060--Hb_023738_010 Hb_093388_010 Hb_093388_010 Hb_029510_060--Hb_093388_010 Hb_119832_010 Hb_119832_010 Hb_029510_060--Hb_119832_010 Hb_001250_030 Hb_001250_030 Hb_029510_060--Hb_001250_030 Hb_000951_070 Hb_000951_070 Hb_029510_060--Hb_000951_070 Hb_003796_010 Hb_003796_010 Hb_029510_060--Hb_003796_010 Hb_023738_010--Hb_093388_010 Hb_004374_090 Hb_004374_090 Hb_023738_010--Hb_004374_090 Hb_023738_010--Hb_001250_030 Hb_003302_010 Hb_003302_010 Hb_023738_010--Hb_003302_010 Hb_000441_080 Hb_000441_080 Hb_023738_010--Hb_000441_080 Hb_093388_010--Hb_001250_030 Hb_000432_020 Hb_000432_020 Hb_093388_010--Hb_000432_020 Hb_003414_040 Hb_003414_040 Hb_093388_010--Hb_003414_040 Hb_005678_030 Hb_005678_030 Hb_093388_010--Hb_005678_030 Hb_000311_110 Hb_000311_110 Hb_119832_010--Hb_000311_110 Hb_009393_110 Hb_009393_110 Hb_119832_010--Hb_009393_110 Hb_004951_030 Hb_004951_030 Hb_119832_010--Hb_004951_030 Hb_003440_080 Hb_003440_080 Hb_119832_010--Hb_003440_080 Hb_119832_010--Hb_003796_010 Hb_003311_020 Hb_003311_020 Hb_001250_030--Hb_003311_020 Hb_001250_030--Hb_003414_040 Hb_001250_030--Hb_000432_020 Hb_010402_040 Hb_010402_040 Hb_000951_070--Hb_010402_040 Hb_000668_180 Hb_000668_180 Hb_000951_070--Hb_000668_180 Hb_089305_040 Hb_089305_040 Hb_000951_070--Hb_089305_040 Hb_000951_070--Hb_003796_010 Hb_000951_070--Hb_003440_080 Hb_004117_320 Hb_004117_320 Hb_000951_070--Hb_004117_320 Hb_003796_010--Hb_089305_040 Hb_004643_020 Hb_004643_020 Hb_003796_010--Hb_004643_020 Hb_003796_010--Hb_004951_030 Hb_003796_010--Hb_009393_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0547899 0.0204815 0.0210629 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00984506 0.257949

CAGE analysis