Hb_007575_010

Information

Type -
Description -
Location Contig7575: 3003-3725
Sequence    

Annotation

kegg
ID vvi:100255866
description cytochrome P450 71A1
nr
ID XP_002278387.1
description PREDICTED: cytochrome P450 71A1 [Vitis vinifera]
swissprot
ID P37119
description Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1
trembl
ID A0A061FC86
description Cytochrome P450, putative OS=Theobroma cacao GN=TCM_034176 PE=4 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 83b1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007575_010 0.0 - - PREDICTED: cytochrome P450 71A1 [Vitis vinifera]
2 Hb_144838_010 0.0883406939 - - hypothetical protein JCGZ_08246 [Jatropha curcas]
3 Hb_017640_010 0.1107232373 - - hypothetical protein JCGZ_18815 [Jatropha curcas]
4 Hb_001250_030 0.1457788461 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000031_200 0.1491244288 - - PREDICTED: trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM3-like [Jatropha curcas]
6 Hb_003169_040 0.1539535044 - - -
7 Hb_004445_030 0.1563568287 - - conserved hypothetical protein [Ricinus communis]
8 Hb_008680_010 0.1572058748 - - -
9 Hb_002598_030 0.1580948578 - - -
10 Hb_004052_130 0.1594759272 - - PREDICTED: cytochrome P450 78A5 [Jatropha curcas]
11 Hb_003900_040 0.16302485 - - hypothetical protein [Lotus japonicus]
12 Hb_047923_030 0.1662260551 - - hypothetical protein JCGZ_09181 [Jatropha curcas]
13 Hb_099878_040 0.1666605023 - - PREDICTED: uncharacterized protein LOC102703670 [Oryza brachyantha]
14 Hb_000672_130 0.1690995065 - - hypothetical protein POPTR_0010s22870g [Populus trichocarpa]
15 Hb_144027_010 0.1702124444 - - -
16 Hb_032717_090 0.1705695033 - - conserved hypothetical protein [Ricinus communis]
17 Hb_004899_210 0.1717360609 - - PREDICTED: respiratory burst oxidase homolog protein E [Jatropha curcas]
18 Hb_147604_010 0.1729237403 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
19 Hb_003414_040 0.1731665302 - - hypothetical protein VITISV_016691 [Vitis vinifera]
20 Hb_002576_010 0.1742882975 - - -

Gene co-expression network

sample Hb_007575_010 Hb_007575_010 Hb_144838_010 Hb_144838_010 Hb_007575_010--Hb_144838_010 Hb_017640_010 Hb_017640_010 Hb_007575_010--Hb_017640_010 Hb_001250_030 Hb_001250_030 Hb_007575_010--Hb_001250_030 Hb_000031_200 Hb_000031_200 Hb_007575_010--Hb_000031_200 Hb_003169_040 Hb_003169_040 Hb_007575_010--Hb_003169_040 Hb_004445_030 Hb_004445_030 Hb_007575_010--Hb_004445_030 Hb_144838_010--Hb_017640_010 Hb_002598_030 Hb_002598_030 Hb_144838_010--Hb_002598_030 Hb_000672_130 Hb_000672_130 Hb_144838_010--Hb_000672_130 Hb_147604_010 Hb_147604_010 Hb_144838_010--Hb_147604_010 Hb_144838_010--Hb_001250_030 Hb_017640_010--Hb_000672_130 Hb_099878_040 Hb_099878_040 Hb_017640_010--Hb_099878_040 Hb_008680_010 Hb_008680_010 Hb_017640_010--Hb_008680_010 Hb_004899_210 Hb_004899_210 Hb_017640_010--Hb_004899_210 Hb_093388_010 Hb_093388_010 Hb_001250_030--Hb_093388_010 Hb_029510_060 Hb_029510_060 Hb_001250_030--Hb_029510_060 Hb_023738_010 Hb_023738_010 Hb_001250_030--Hb_023738_010 Hb_003311_020 Hb_003311_020 Hb_001250_030--Hb_003311_020 Hb_003414_040 Hb_003414_040 Hb_001250_030--Hb_003414_040 Hb_000432_020 Hb_000432_020 Hb_001250_030--Hb_000432_020 Hb_008918_030 Hb_008918_030 Hb_000031_200--Hb_008918_030 Hb_000879_260 Hb_000879_260 Hb_000031_200--Hb_000879_260 Hb_000031_200--Hb_144838_010 Hb_000373_140 Hb_000373_140 Hb_000031_200--Hb_000373_140 Hb_001508_010 Hb_001508_010 Hb_000031_200--Hb_001508_010 Hb_000512_050 Hb_000512_050 Hb_003169_040--Hb_000512_050 Hb_005623_060 Hb_005623_060 Hb_003169_040--Hb_005623_060 Hb_180214_010 Hb_180214_010 Hb_003169_040--Hb_180214_010 Hb_150516_010 Hb_150516_010 Hb_003169_040--Hb_150516_010 Hb_032717_090 Hb_032717_090 Hb_003169_040--Hb_032717_090 Hb_003900_040 Hb_003900_040 Hb_003169_040--Hb_003900_040 Hb_054127_020 Hb_054127_020 Hb_004445_030--Hb_054127_020 Hb_047923_030 Hb_047923_030 Hb_004445_030--Hb_047923_030 Hb_002576_010 Hb_002576_010 Hb_004445_030--Hb_002576_010 Hb_004052_130 Hb_004052_130 Hb_004445_030--Hb_004052_130 Hb_009355_010 Hb_009355_010 Hb_004445_030--Hb_009355_010 Hb_004445_030--Hb_144838_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.05461 0.235704 0.215536 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.364947 0 0.889699 16.1827

CAGE analysis