Hb_004899_210

Information

Type -
Description -
Location Contig4899: 171486-176925
Sequence    

Annotation

kegg
ID rcu:RCOM_0709670
description respiratory burst oxidase, putative (EC:1.6.3.1)
nr
ID XP_012077105.1
description PREDICTED: respiratory burst oxidase homolog protein E [Jatropha curcas]
swissprot
ID O81211
description Respiratory burst oxidase homolog protein E OS=Arabidopsis thaliana GN=RBOHE PE=2 SV=2
trembl
ID A0A067KCU1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07528 PE=4 SV=1
Gene Ontology
ID GO:0016020
description respiratory burst oxidase homolog protein e

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004899_210 0.0 - - PREDICTED: respiratory burst oxidase homolog protein E [Jatropha curcas]
2 Hb_003900_040 0.0732014548 - - hypothetical protein [Lotus japonicus]
3 Hb_144027_010 0.1112706081 - - -
4 Hb_007575_020 0.1173461306 - - cytochrome P450, putative [Ricinus communis]
5 Hb_001250_030 0.1253285704 - - conserved hypothetical protein [Ricinus communis]
6 Hb_008642_050 0.1284090877 - - -
7 Hb_017640_010 0.1349382212 - - hypothetical protein JCGZ_18815 [Jatropha curcas]
8 Hb_045785_010 0.140212301 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
9 Hb_000060_130 0.1429161127 - - -
10 Hb_003169_040 0.1464143669 - - -
11 Hb_000289_090 0.1478162534 - - -
12 Hb_007543_020 0.1481679264 - - PREDICTED: uncharacterized protein LOC104229533, partial [Nicotiana sylvestris]
13 Hb_023738_010 0.1511408793 - - Concanavalin A-like lectin protein kinase family protein [Theobroma cacao]
14 Hb_029510_060 0.1540310073 - - PREDICTED: probable plastidic glucose transporter 3 [Jatropha curcas]
15 Hb_012796_030 0.1582017486 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
16 Hb_001383_080 0.158632944 - - OSJNBa0019D11.8 [Oryza sativa Japonica Group]
17 Hb_180214_010 0.1618360836 - - PREDICTED: glutamic acid-rich protein-like [Jatropha curcas]
18 Hb_119832_010 0.1646272728 - - -
19 Hb_000136_080 0.1647289092 - - hypothetical protein AALP_AA8G499800 [Arabis alpina]
20 Hb_001174_050 0.1699640131 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]

Gene co-expression network

sample Hb_004899_210 Hb_004899_210 Hb_003900_040 Hb_003900_040 Hb_004899_210--Hb_003900_040 Hb_144027_010 Hb_144027_010 Hb_004899_210--Hb_144027_010 Hb_007575_020 Hb_007575_020 Hb_004899_210--Hb_007575_020 Hb_001250_030 Hb_001250_030 Hb_004899_210--Hb_001250_030 Hb_008642_050 Hb_008642_050 Hb_004899_210--Hb_008642_050 Hb_017640_010 Hb_017640_010 Hb_004899_210--Hb_017640_010 Hb_003900_040--Hb_144027_010 Hb_180214_010 Hb_180214_010 Hb_003900_040--Hb_180214_010 Hb_032717_090 Hb_032717_090 Hb_003900_040--Hb_032717_090 Hb_003900_040--Hb_001250_030 Hb_003169_040 Hb_003169_040 Hb_003900_040--Hb_003169_040 Hb_117001_010 Hb_117001_010 Hb_144027_010--Hb_117001_010 Hb_001383_080 Hb_001383_080 Hb_144027_010--Hb_001383_080 Hb_144027_010--Hb_017640_010 Hb_144027_010--Hb_003169_040 Hb_000269_040 Hb_000269_040 Hb_007575_020--Hb_000269_040 Hb_045785_010 Hb_045785_010 Hb_007575_020--Hb_045785_010 Hb_000289_090 Hb_000289_090 Hb_007575_020--Hb_000289_090 Hb_007575_020--Hb_008642_050 Hb_007575_020--Hb_017640_010 Hb_093388_010 Hb_093388_010 Hb_001250_030--Hb_093388_010 Hb_029510_060 Hb_029510_060 Hb_001250_030--Hb_029510_060 Hb_023738_010 Hb_023738_010 Hb_001250_030--Hb_023738_010 Hb_003311_020 Hb_003311_020 Hb_001250_030--Hb_003311_020 Hb_003414_040 Hb_003414_040 Hb_001250_030--Hb_003414_040 Hb_000432_020 Hb_000432_020 Hb_001250_030--Hb_000432_020 Hb_008642_050--Hb_045785_010 Hb_058095_030 Hb_058095_030 Hb_008642_050--Hb_058095_030 Hb_094694_010 Hb_094694_010 Hb_008642_050--Hb_094694_010 Hb_039547_010 Hb_039547_010 Hb_008642_050--Hb_039547_010 Hb_000916_010 Hb_000916_010 Hb_008642_050--Hb_000916_010 Hb_007575_010 Hb_007575_010 Hb_017640_010--Hb_007575_010 Hb_144838_010 Hb_144838_010 Hb_017640_010--Hb_144838_010 Hb_000672_130 Hb_000672_130 Hb_017640_010--Hb_000672_130 Hb_099878_040 Hb_099878_040 Hb_017640_010--Hb_099878_040 Hb_008680_010 Hb_008680_010 Hb_017640_010--Hb_008680_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00860144 0.724797 0.12705 0.0665663 0 0.0129586
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.236297 2.19366

CAGE analysis