Hb_058095_030

Information

Type -
Description -
Location Contig58095: 12284-13855
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_058095_030 0.0 - - -
2 Hb_000028_270 0.0778412103 - - -
3 Hb_002585_060 0.0888853119 - - PREDICTED: uncharacterized protein LOC104899128, partial [Beta vulgaris subsp. vulgaris]
4 Hb_005765_020 0.1029546732 - - -
5 Hb_004063_010 0.106708608 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_118046_010 0.1336564603 - - PREDICTED: uncharacterized protein LOC102596706 [Solanum tuberosum]
7 Hb_008642_050 0.1343924604 - - -
8 Hb_003727_060 0.1371429062 - - nucleic acid binding protein, putative [Ricinus communis]
9 Hb_003442_120 0.158074889 - - hypothetical protein VITISV_019818 [Vitis vinifera]
10 Hb_168909_010 0.1644221926 - - PREDICTED: uncharacterized protein LOC105640156 [Jatropha curcas]
11 Hb_000243_050 0.1669015083 - - ADP-ribosylation factor, putative [Ricinus communis]
12 Hb_001301_070 0.1690928402 - - -
13 Hb_001452_090 0.1707700211 - - PREDICTED: serine carboxypeptidase II-3-like [Vitis vinifera]
14 Hb_002815_040 0.1712295854 - - PREDICTED: uncharacterized protein LOC104107451 [Nicotiana tomentosiformis]
15 Hb_000101_320 0.1712653541 - - -
16 Hb_000280_120 0.1731003832 - - PREDICTED: uncharacterized protein LOC105643934 [Jatropha curcas]
17 Hb_000192_060 0.1775342221 - - -
18 Hb_006992_030 0.1776449902 - - PREDICTED: uncharacterized protein LOC104898613 [Beta vulgaris subsp. vulgaris]
19 Hb_138667_010 0.1796921686 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
20 Hb_114121_010 0.1823229721 - - -

Gene co-expression network

sample Hb_058095_030 Hb_058095_030 Hb_000028_270 Hb_000028_270 Hb_058095_030--Hb_000028_270 Hb_002585_060 Hb_002585_060 Hb_058095_030--Hb_002585_060 Hb_005765_020 Hb_005765_020 Hb_058095_030--Hb_005765_020 Hb_004063_010 Hb_004063_010 Hb_058095_030--Hb_004063_010 Hb_118046_010 Hb_118046_010 Hb_058095_030--Hb_118046_010 Hb_008642_050 Hb_008642_050 Hb_058095_030--Hb_008642_050 Hb_000028_270--Hb_118046_010 Hb_000028_270--Hb_004063_010 Hb_003442_120 Hb_003442_120 Hb_000028_270--Hb_003442_120 Hb_000028_270--Hb_005765_020 Hb_000028_270--Hb_002585_060 Hb_002585_060--Hb_004063_010 Hb_003727_060 Hb_003727_060 Hb_002585_060--Hb_003727_060 Hb_138667_010 Hb_138667_010 Hb_002585_060--Hb_138667_010 Hb_000243_050 Hb_000243_050 Hb_002585_060--Hb_000243_050 Hb_000280_120 Hb_000280_120 Hb_002585_060--Hb_000280_120 Hb_006992_030 Hb_006992_030 Hb_005765_020--Hb_006992_030 Hb_005765_020--Hb_002585_060 Hb_003927_020 Hb_003927_020 Hb_005765_020--Hb_003927_020 Hb_032299_070 Hb_032299_070 Hb_005765_020--Hb_032299_070 Hb_004063_010--Hb_003727_060 Hb_004063_010--Hb_118046_010 Hb_004063_010--Hb_003442_120 Hb_118046_010--Hb_003442_120 Hb_118046_010--Hb_003727_060 Hb_130579_050 Hb_130579_050 Hb_118046_010--Hb_130579_050 Hb_002025_240 Hb_002025_240 Hb_118046_010--Hb_002025_240 Hb_045785_010 Hb_045785_010 Hb_008642_050--Hb_045785_010 Hb_004899_210 Hb_004899_210 Hb_008642_050--Hb_004899_210 Hb_094694_010 Hb_094694_010 Hb_008642_050--Hb_094694_010 Hb_039547_010 Hb_039547_010 Hb_008642_050--Hb_039547_010 Hb_000916_010 Hb_000916_010 Hb_008642_050--Hb_000916_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.102538 0.0180204 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0659537 0.167392

CAGE analysis