Hb_130579_050

Information

Type -
Description -
Location Contig130579: 49414-52204
Sequence    

Annotation

kegg
ID pop:POPTR_0017s13200g
description hypothetical protein
nr
ID KDP24281.1
description hypothetical protein JCGZ_25577 [Jatropha curcas]
swissprot
ID Q9SCZ4
description Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1
trembl
ID A0A067JJZ1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25577 PE=3 SV=1
Gene Ontology
ID GO:0004672
description receptor-like protein kinase feronia

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_130579_050 0.0 - - hypothetical protein JCGZ_25577 [Jatropha curcas]
2 Hb_002025_240 0.0459635519 - - -
3 Hb_003442_120 0.0844143542 - - hypothetical protein VITISV_019818 [Vitis vinifera]
4 Hb_118046_010 0.0868375002 - - PREDICTED: uncharacterized protein LOC102596706 [Solanum tuberosum]
5 Hb_004063_010 0.1229501593 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_003727_060 0.1364906198 - - nucleic acid binding protein, putative [Ricinus communis]
7 Hb_000028_270 0.148054784 - - -
8 Hb_027337_050 0.1500752568 - - polyprotein [Citrus endogenous pararetrovirus]
9 Hb_012807_070 0.1591737988 - - PREDICTED: UDP-glycosyltransferase 86A2 [Jatropha curcas]
10 Hb_001205_170 0.1834131523 - - PREDICTED: uncharacterized protein LOC105633940 isoform X1 [Jatropha curcas]
11 Hb_058095_030 0.186085459 - - -
12 Hb_002585_060 0.1966726577 - - PREDICTED: uncharacterized protein LOC104899128, partial [Beta vulgaris subsp. vulgaris]
13 Hb_009780_010 0.1973323406 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000236_430 0.1978657839 - - PREDICTED: uncharacterized protein LOC105633302 [Jatropha curcas]
15 Hb_172426_010 0.1998728649 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curcas]
16 Hb_042141_010 0.2001075459 - - -
17 Hb_002871_170 0.2019603269 transcription factor TF Family: NAC NAC domain-containing protein 21/22, putative [Ricinus communis]
18 Hb_017098_020 0.2035475431 - - Zinc finger protein GIS2 [Medicago truncatula]
19 Hb_071130_020 0.2058687449 - - -
20 Hb_045785_010 0.205935368 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]

Gene co-expression network

sample Hb_130579_050 Hb_130579_050 Hb_002025_240 Hb_002025_240 Hb_130579_050--Hb_002025_240 Hb_003442_120 Hb_003442_120 Hb_130579_050--Hb_003442_120 Hb_118046_010 Hb_118046_010 Hb_130579_050--Hb_118046_010 Hb_004063_010 Hb_004063_010 Hb_130579_050--Hb_004063_010 Hb_003727_060 Hb_003727_060 Hb_130579_050--Hb_003727_060 Hb_000028_270 Hb_000028_270 Hb_130579_050--Hb_000028_270 Hb_002025_240--Hb_003442_120 Hb_002025_240--Hb_118046_010 Hb_002025_240--Hb_004063_010 Hb_002025_240--Hb_003727_060 Hb_027337_050 Hb_027337_050 Hb_002025_240--Hb_027337_050 Hb_003442_120--Hb_118046_010 Hb_003442_120--Hb_004063_010 Hb_003442_120--Hb_003727_060 Hb_003442_120--Hb_000028_270 Hb_118046_010--Hb_004063_010 Hb_118046_010--Hb_003727_060 Hb_118046_010--Hb_000028_270 Hb_004063_010--Hb_003727_060 Hb_002585_060 Hb_002585_060 Hb_004063_010--Hb_002585_060 Hb_058095_030 Hb_058095_030 Hb_004063_010--Hb_058095_030 Hb_004063_010--Hb_000028_270 Hb_003727_060--Hb_002585_060 Hb_003938_100 Hb_003938_100 Hb_003727_060--Hb_003938_100 Hb_038190_030 Hb_038190_030 Hb_003727_060--Hb_038190_030 Hb_000028_270--Hb_058095_030 Hb_005765_020 Hb_005765_020 Hb_000028_270--Hb_005765_020 Hb_000028_270--Hb_002585_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.107221 0.0203914 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0186831 0.0938654

CAGE analysis