Hb_039547_010

Information

Type -
Description -
Location Contig39547: 76-2306
Sequence    

Annotation

kegg
ID egr:104424835
description equilibrative nucleotide transporter 3-like
nr
ID XP_012088369.1
description PREDICTED: equilibrative nucleotide transporter 3-like [Jatropha curcas]
swissprot
ID Q9M0Y3
description Equilibrative nucleotide transporter 3 OS=Arabidopsis thaliana GN=ENT3 PE=1 SV=1
trembl
ID A0A067JJT0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25863 PE=4 SV=1
Gene Ontology
ID GO:0016021
description equilibrative nucleotide transporter 3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_039547_010 0.0 - - PREDICTED: equilibrative nucleotide transporter 3-like [Jatropha curcas]
2 Hb_000916_010 0.0009126977 - - hypothetical protein POPTR_0001s08730g [Populus trichocarpa]
3 Hb_000209_010 0.0274344543 - - -
4 Hb_151411_010 0.0436708698 - - -
5 Hb_094694_010 0.0489826508 - - -
6 Hb_000192_060 0.0519366808 - - -
7 Hb_000248_020 0.0611949899 - - PREDICTED: uncharacterized protein LOC104243878 [Nicotiana sylvestris]
8 Hb_001301_070 0.0681642034 - - -
9 Hb_179183_010 0.0725797013 - - RALF-LIKE 32 family protein [Populus trichocarpa]
10 Hb_000975_060 0.0764788325 - - -
11 Hb_159124_010 0.0938641212 - - PREDICTED: uncharacterized protein LOC103332224 [Prunus mume]
12 Hb_099878_040 0.0983424416 - - PREDICTED: uncharacterized protein LOC102703670 [Oryza brachyantha]
13 Hb_006120_160 0.1061506219 - - -
14 Hb_101034_010 0.1088058345 - - -
15 Hb_005432_020 0.1113991775 - - -
16 Hb_181013_010 0.1144600297 - - PREDICTED: uncharacterized protein LOC105629028 [Jatropha curcas]
17 Hb_000142_090 0.1171469031 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Jatropha curcas]
18 Hb_168909_010 0.1205726243 - - PREDICTED: uncharacterized protein LOC105640156 [Jatropha curcas]
19 Hb_134377_070 0.1222484363 - - -
20 Hb_008642_050 0.136667809 - - -

Gene co-expression network

sample Hb_039547_010 Hb_039547_010 Hb_000916_010 Hb_000916_010 Hb_039547_010--Hb_000916_010 Hb_000209_010 Hb_000209_010 Hb_039547_010--Hb_000209_010 Hb_151411_010 Hb_151411_010 Hb_039547_010--Hb_151411_010 Hb_094694_010 Hb_094694_010 Hb_039547_010--Hb_094694_010 Hb_000192_060 Hb_000192_060 Hb_039547_010--Hb_000192_060 Hb_000248_020 Hb_000248_020 Hb_039547_010--Hb_000248_020 Hb_000916_010--Hb_000209_010 Hb_000916_010--Hb_151411_010 Hb_000916_010--Hb_094694_010 Hb_000916_010--Hb_000192_060 Hb_000916_010--Hb_000248_020 Hb_000209_010--Hb_151411_010 Hb_000209_010--Hb_000192_060 Hb_001301_070 Hb_001301_070 Hb_000209_010--Hb_001301_070 Hb_000209_010--Hb_094694_010 Hb_151411_010--Hb_000192_060 Hb_151411_010--Hb_001301_070 Hb_151411_010--Hb_094694_010 Hb_094694_010--Hb_000248_020 Hb_000975_060 Hb_000975_060 Hb_094694_010--Hb_000975_060 Hb_099878_040 Hb_099878_040 Hb_094694_010--Hb_099878_040 Hb_000192_060--Hb_001301_070 Hb_179183_010 Hb_179183_010 Hb_000192_060--Hb_179183_010 Hb_000248_020--Hb_000975_060 Hb_000248_020--Hb_099878_040 Hb_159124_010 Hb_159124_010 Hb_000248_020--Hb_159124_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0324251 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0140652 0.0722206

CAGE analysis