Hb_151411_010

Information

Type -
Description -
Location Contig151411: 3853-4776
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_151411_010 0.0 - - -
2 Hb_000209_010 0.0168614643 - - -
3 Hb_000192_060 0.0201155789 - - -
4 Hb_000916_010 0.042956673 - - hypothetical protein POPTR_0001s08730g [Populus trichocarpa]
5 Hb_039547_010 0.0436708698 - - PREDICTED: equilibrative nucleotide transporter 3-like [Jatropha curcas]
6 Hb_001301_070 0.0440946165 - - -
7 Hb_094694_010 0.0848032756 - - -
8 Hb_000248_020 0.0973267412 - - PREDICTED: uncharacterized protein LOC104243878 [Nicotiana sylvestris]
9 Hb_002056_140 0.103179729 - - -
10 Hb_179183_010 0.1034136793 - - RALF-LIKE 32 family protein [Populus trichocarpa]
11 Hb_005852_010 0.1140883166 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
12 Hb_000975_060 0.1161844957 - - -
13 Hb_003938_100 0.1183872986 - - conserved hypothetical protein [Ricinus communis]
14 Hb_168909_010 0.1189727117 - - PREDICTED: uncharacterized protein LOC105640156 [Jatropha curcas]
15 Hb_000243_050 0.120548415 - - ADP-ribosylation factor, putative [Ricinus communis]
16 Hb_099878_040 0.1352913593 - - PREDICTED: uncharacterized protein LOC102703670 [Oryza brachyantha]
17 Hb_159124_010 0.1370206064 - - PREDICTED: uncharacterized protein LOC103332224 [Prunus mume]
18 Hb_006120_160 0.1470731738 - - -
19 Hb_008642_050 0.1471672122 - - -
20 Hb_000269_040 0.1491597186 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]

Gene co-expression network

sample Hb_151411_010 Hb_151411_010 Hb_000209_010 Hb_000209_010 Hb_151411_010--Hb_000209_010 Hb_000192_060 Hb_000192_060 Hb_151411_010--Hb_000192_060 Hb_000916_010 Hb_000916_010 Hb_151411_010--Hb_000916_010 Hb_039547_010 Hb_039547_010 Hb_151411_010--Hb_039547_010 Hb_001301_070 Hb_001301_070 Hb_151411_010--Hb_001301_070 Hb_094694_010 Hb_094694_010 Hb_151411_010--Hb_094694_010 Hb_000209_010--Hb_000192_060 Hb_000209_010--Hb_000916_010 Hb_000209_010--Hb_039547_010 Hb_000209_010--Hb_001301_070 Hb_000209_010--Hb_094694_010 Hb_000192_060--Hb_001301_070 Hb_000192_060--Hb_000916_010 Hb_000192_060--Hb_039547_010 Hb_179183_010 Hb_179183_010 Hb_000192_060--Hb_179183_010 Hb_000916_010--Hb_039547_010 Hb_000916_010--Hb_094694_010 Hb_000248_020 Hb_000248_020 Hb_000916_010--Hb_000248_020 Hb_039547_010--Hb_094694_010 Hb_039547_010--Hb_000248_020 Hb_001301_070--Hb_000916_010 Hb_001301_070--Hb_039547_010 Hb_000243_050 Hb_000243_050 Hb_001301_070--Hb_000243_050 Hb_094694_010--Hb_000248_020 Hb_000975_060 Hb_000975_060 Hb_094694_010--Hb_000975_060 Hb_099878_040 Hb_099878_040 Hb_094694_010--Hb_099878_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0717092 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.026092 0.126709

CAGE analysis