Hb_000248_020

Information

Type -
Description -
Location Contig248: 63191-63541
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_009797441.1
description PREDICTED: uncharacterized protein LOC104243878 [Nicotiana sylvestris]
swissprot
ID -
description -
trembl
ID W9RUR8
description Uncharacterized protein OS=Morus notabilis GN=L484_016638 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000248_020 0.0 - - PREDICTED: uncharacterized protein LOC104243878 [Nicotiana sylvestris]
2 Hb_094694_010 0.0126279157 - - -
3 Hb_000975_060 0.0226653382 - - -
4 Hb_099878_040 0.0381924072 - - PREDICTED: uncharacterized protein LOC102703670 [Oryza brachyantha]
5 Hb_039547_010 0.0611949899 - - PREDICTED: equilibrative nucleotide transporter 3-like [Jatropha curcas]
6 Hb_000916_010 0.0621010742 - - hypothetical protein POPTR_0001s08730g [Populus trichocarpa]
7 Hb_159124_010 0.0727363717 - - PREDICTED: uncharacterized protein LOC103332224 [Prunus mume]
8 Hb_000209_010 0.0847582198 - - -
9 Hb_000142_090 0.0964777556 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Jatropha curcas]
10 Hb_181013_010 0.0964846654 - - PREDICTED: uncharacterized protein LOC105629028 [Jatropha curcas]
11 Hb_005432_020 0.0969048849 - - -
12 Hb_134377_070 0.0971733028 - - -
13 Hb_151411_010 0.0973267412 - - -
14 Hb_101034_010 0.0977091287 - - -
15 Hb_006120_160 0.0991393202 - - -
16 Hb_179183_010 0.1024677374 - - RALF-LIKE 32 family protein [Populus trichocarpa]
17 Hb_047923_030 0.1094621266 - - hypothetical protein JCGZ_09181 [Jatropha curcas]
18 Hb_000192_060 0.1109546943 - - -
19 Hb_002576_010 0.1283138774 - - -
20 Hb_001301_070 0.1290136298 - - -

Gene co-expression network

sample Hb_000248_020 Hb_000248_020 Hb_094694_010 Hb_094694_010 Hb_000248_020--Hb_094694_010 Hb_000975_060 Hb_000975_060 Hb_000248_020--Hb_000975_060 Hb_099878_040 Hb_099878_040 Hb_000248_020--Hb_099878_040 Hb_039547_010 Hb_039547_010 Hb_000248_020--Hb_039547_010 Hb_000916_010 Hb_000916_010 Hb_000248_020--Hb_000916_010 Hb_159124_010 Hb_159124_010 Hb_000248_020--Hb_159124_010 Hb_094694_010--Hb_000975_060 Hb_094694_010--Hb_039547_010 Hb_094694_010--Hb_000916_010 Hb_094694_010--Hb_099878_040 Hb_000209_010 Hb_000209_010 Hb_094694_010--Hb_000209_010 Hb_000975_060--Hb_099878_040 Hb_000975_060--Hb_159124_010 Hb_000975_060--Hb_039547_010 Hb_000975_060--Hb_000916_010 Hb_099878_040--Hb_159124_010 Hb_047923_030 Hb_047923_030 Hb_099878_040--Hb_047923_030 Hb_134377_070 Hb_134377_070 Hb_099878_040--Hb_134377_070 Hb_039547_010--Hb_000916_010 Hb_039547_010--Hb_000209_010 Hb_151411_010 Hb_151411_010 Hb_039547_010--Hb_151411_010 Hb_000192_060 Hb_000192_060 Hb_039547_010--Hb_000192_060 Hb_000916_010--Hb_000209_010 Hb_000916_010--Hb_151411_010 Hb_000916_010--Hb_000192_060 Hb_181013_010 Hb_181013_010 Hb_159124_010--Hb_181013_010 Hb_005432_020 Hb_005432_020 Hb_159124_010--Hb_005432_020 Hb_000142_090 Hb_000142_090 Hb_159124_010--Hb_000142_090 Hb_101034_010 Hb_101034_010 Hb_159124_010--Hb_101034_010 Hb_159124_010--Hb_134377_070 Hb_006120_160 Hb_006120_160 Hb_159124_010--Hb_006120_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.237688 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0904634 0.682551

CAGE analysis