Hb_005054_320

Information

Type -
Description -
Location Contig5054: 242385-244345
Sequence    

Annotation

kegg
ID rcu:RCOM_0592270
description hypothetical protein
nr
ID XP_012087772.1
description PREDICTED: uncharacterized protein LOC105646518 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LKG8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01314 PE=4 SV=1
Gene Ontology
ID GO:0005634
description tetratricopeptide repeat-like superfamily

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005054_320 0.0 - - PREDICTED: uncharacterized protein LOC105646518 [Jatropha curcas]
2 Hb_010180_050 0.1217642025 - - PREDICTED: CBL-interacting protein kinase 2 [Jatropha curcas]
3 Hb_004007_210 0.1331420937 transcription factor TF Family: GNAT N-acetyltransferase, putative [Ricinus communis]
4 Hb_010055_020 0.1375470982 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
5 Hb_019026_040 0.1396079981 - - S-locus lectin protein kinase family protein [Theobroma cacao]
6 Hb_183025_010 0.1404310319 - - PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Jatropha curcas]
7 Hb_000049_290 0.1433621859 - - PREDICTED: multiple C2 and transmembrane domain-containing protein 1 [Jatropha curcas]
8 Hb_002030_100 0.1479884443 - - PREDICTED: putative clathrin assembly protein At4g40080 [Jatropha curcas]
9 Hb_000656_260 0.1501713074 - - PREDICTED: uncharacterized protein LOC105631376 [Jatropha curcas]
10 Hb_000032_590 0.1505668382 - - PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1 [Jatropha curcas]
11 Hb_011457_080 0.1505778658 - - PREDICTED: serine/threonine-protein kinase HT1 isoform X1 [Jatropha curcas]
12 Hb_000112_040 0.1511422317 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
13 Hb_000230_250 0.156258474 - - PREDICTED: pyruvate, phosphate dikinase, chloroplastic [Jatropha curcas]
14 Hb_010175_050 0.1571855238 - - PREDICTED: uncharacterized protein LOC105639906 [Jatropha curcas]
15 Hb_003106_240 0.159328522 - - hypothetical protein POPTR_0012s07880g [Populus trichocarpa]
16 Hb_000594_150 0.1613840207 - - PREDICTED: serine/threonine-protein kinase STN7, chloroplastic-like isoform X1 [Nelumbo nucifera]
17 Hb_000072_240 0.1621591506 transcription factor TF Family: C2C2-CO-like zinc finger protein, putative [Ricinus communis]
18 Hb_004907_070 0.1629303673 - - PREDICTED: protein phosphatase 2C 37 [Jatropha curcas]
19 Hb_002010_080 0.1640190464 - - PREDICTED: probable receptor-like protein kinase At1g11050 [Jatropha curcas]
20 Hb_004976_080 0.1654680074 desease resistance Gene Name: NB-ARC PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]

Gene co-expression network

sample Hb_005054_320 Hb_005054_320 Hb_010180_050 Hb_010180_050 Hb_005054_320--Hb_010180_050 Hb_004007_210 Hb_004007_210 Hb_005054_320--Hb_004007_210 Hb_010055_020 Hb_010055_020 Hb_005054_320--Hb_010055_020 Hb_019026_040 Hb_019026_040 Hb_005054_320--Hb_019026_040 Hb_183025_010 Hb_183025_010 Hb_005054_320--Hb_183025_010 Hb_000049_290 Hb_000049_290 Hb_005054_320--Hb_000049_290 Hb_000072_240 Hb_000072_240 Hb_010180_050--Hb_000072_240 Hb_000594_150 Hb_000594_150 Hb_010180_050--Hb_000594_150 Hb_002999_130 Hb_002999_130 Hb_010180_050--Hb_002999_130 Hb_000230_250 Hb_000230_250 Hb_010180_050--Hb_000230_250 Hb_003106_240 Hb_003106_240 Hb_010180_050--Hb_003106_240 Hb_004007_210--Hb_000230_250 Hb_004007_210--Hb_019026_040 Hb_010175_050 Hb_010175_050 Hb_004007_210--Hb_010175_050 Hb_005772_020 Hb_005772_020 Hb_004007_210--Hb_005772_020 Hb_004880_120 Hb_004880_120 Hb_004007_210--Hb_004880_120 Hb_000363_050 Hb_000363_050 Hb_010055_020--Hb_000363_050 Hb_000002_090 Hb_000002_090 Hb_010055_020--Hb_000002_090 Hb_002871_170 Hb_002871_170 Hb_010055_020--Hb_002871_170 Hb_034013_010 Hb_034013_010 Hb_010055_020--Hb_034013_010 Hb_004884_210 Hb_004884_210 Hb_010055_020--Hb_004884_210 Hb_003811_030 Hb_003811_030 Hb_019026_040--Hb_003811_030 Hb_107552_020 Hb_107552_020 Hb_019026_040--Hb_107552_020 Hb_019026_040--Hb_010175_050 Hb_000347_380 Hb_000347_380 Hb_019026_040--Hb_000347_380 Hb_036492_020 Hb_036492_020 Hb_019026_040--Hb_036492_020 Hb_029584_110 Hb_029584_110 Hb_183025_010--Hb_029584_110 Hb_003029_010 Hb_003029_010 Hb_183025_010--Hb_003029_010 Hb_000656_260 Hb_000656_260 Hb_183025_010--Hb_000656_260 Hb_170401_010 Hb_170401_010 Hb_183025_010--Hb_170401_010 Hb_000732_160 Hb_000732_160 Hb_183025_010--Hb_000732_160 Hb_073171_050 Hb_073171_050 Hb_183025_010--Hb_073171_050 Hb_022487_010 Hb_022487_010 Hb_000049_290--Hb_022487_010 Hb_004324_220 Hb_004324_220 Hb_000049_290--Hb_004324_220 Hb_000049_290--Hb_000363_050 Hb_000140_220 Hb_000140_220 Hb_000049_290--Hb_000140_220 Hb_064293_010 Hb_064293_010 Hb_000049_290--Hb_064293_010 Hb_000331_220 Hb_000331_220 Hb_000049_290--Hb_000331_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.032205 1.2317 0.688116 0.240755 0.0107513 0.0480082
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.107047 0.93152

CAGE analysis