Hb_001046_040

Information

Type -
Description -
Location Contig1046: 78340-79782
Sequence    

Annotation

kegg
ID rcu:RCOM_0812330
description UDP-glucosyltransferase, putative (EC:2.4.1.115)
nr
ID XP_002518723.1
description UDP-glucosyltransferase, putative [Ricinus communis]
swissprot
ID Q9AT54
description Scopoletin glucosyltransferase OS=Nicotiana tabacum GN=TOGT1 PE=1 SV=1
trembl
ID B9RYD9
description UDP-glucosyltransferase, putative OS=Ricinus communis GN=RCOM_0812330 PE=3 SV=1
Gene Ontology
ID GO:0047213
description scopoletin glucosyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01599: 78760-79730
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001046_040 0.0 - - UDP-glucosyltransferase, putative [Ricinus communis]
2 Hb_044624_010 0.0652958812 - - -
3 Hb_000813_090 0.0862483797 - - hypothetical protein CARUB_v10019318mg [Capsella rubella]
4 Hb_115114_010 0.086805231 - - conserved hypothetical protein [Ricinus communis]
5 Hb_004324_220 0.0908165748 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 53 [Jatropha curcas]
6 Hb_175670_010 0.0921927538 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
7 Hb_004143_140 0.0986555183 - - glycosyltransferase, partial [Arabidopsis thaliana]
8 Hb_001821_050 0.1052286625 - - hypothetical protein CICLE_v10032084mg [Citrus clementina]
9 Hb_027474_010 0.1053246155 - - PREDICTED: uncharacterized protein LOC105629982 [Jatropha curcas]
10 Hb_009557_080 0.1096911729 - - PREDICTED: glutaredoxin-C9-like [Populus euphratica]
11 Hb_007007_090 0.1122832351 - - phospholipase d beta, putative [Ricinus communis]
12 Hb_005074_010 0.1134005285 - - PREDICTED: uncharacterized protein LOC105644456 [Jatropha curcas]
13 Hb_000313_100 0.1155169799 rubber biosynthesis Gene Name: CPT4 PREDICTED: rubber cis-polyprenyltransferase HRT2 [Jatropha curcas]
14 Hb_005271_180 0.1166861128 - - Leucine-rich repeat receptor protein kinase EXS precursor, putative [Ricinus communis]
15 Hb_001989_080 0.1189714074 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
16 Hb_001677_120 0.1217252345 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
17 Hb_002375_080 0.1261425619 - - conserved hypothetical protein [Ricinus communis]
18 Hb_026415_010 0.1283598212 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
19 Hb_003562_040 0.1300348128 - - PREDICTED: septum-promoting GTP-binding protein 1-like [Jatropha curcas]
20 Hb_132259_010 0.1326430705 - - PREDICTED: WAT1-related protein At5g64700 [Jatropha curcas]

Gene co-expression network

sample Hb_001046_040 Hb_001046_040 Hb_044624_010 Hb_044624_010 Hb_001046_040--Hb_044624_010 Hb_000813_090 Hb_000813_090 Hb_001046_040--Hb_000813_090 Hb_115114_010 Hb_115114_010 Hb_001046_040--Hb_115114_010 Hb_004324_220 Hb_004324_220 Hb_001046_040--Hb_004324_220 Hb_175670_010 Hb_175670_010 Hb_001046_040--Hb_175670_010 Hb_004143_140 Hb_004143_140 Hb_001046_040--Hb_004143_140 Hb_044624_010--Hb_004324_220 Hb_022487_010 Hb_022487_010 Hb_044624_010--Hb_022487_010 Hb_044624_010--Hb_175670_010 Hb_044624_010--Hb_115114_010 Hb_044624_010--Hb_000813_090 Hb_000813_090--Hb_115114_010 Hb_026415_010 Hb_026415_010 Hb_000813_090--Hb_026415_010 Hb_009557_080 Hb_009557_080 Hb_000813_090--Hb_009557_080 Hb_000041_160 Hb_000041_160 Hb_000813_090--Hb_000041_160 Hb_132259_010 Hb_132259_010 Hb_115114_010--Hb_132259_010 Hb_004879_030 Hb_004879_030 Hb_115114_010--Hb_004879_030 Hb_000140_220 Hb_000140_220 Hb_115114_010--Hb_000140_220 Hb_004324_220--Hb_022487_010 Hb_004324_220--Hb_175670_010 Hb_000049_290 Hb_000049_290 Hb_004324_220--Hb_000049_290 Hb_000313_100 Hb_000313_100 Hb_004324_220--Hb_000313_100 Hb_175670_010--Hb_000313_100 Hb_005569_030 Hb_005569_030 Hb_175670_010--Hb_005569_030 Hb_003562_040 Hb_003562_040 Hb_175670_010--Hb_003562_040 Hb_001989_080 Hb_001989_080 Hb_004143_140--Hb_001989_080 Hb_004143_140--Hb_175670_010 Hb_004143_140--Hb_044624_010 Hb_027474_010 Hb_027474_010 Hb_004143_140--Hb_027474_010 Hb_005271_180 Hb_005271_180 Hb_004143_140--Hb_005271_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.93339 1.06314 1.89309 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0256922 0 0.400174 2.36105

CAGE analysis