Hb_010904_010

Information

Type -
Description -
Location Contig10904: 29196-30724
Sequence    

Annotation

kegg
ID pop:POPTR_0007s00830g
description POPTRDRAFT_763717; hypothetical protein
nr
ID XP_012066213.1
description PREDICTED: probable receptor-like protein kinase At5g39030 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L6J4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23780 PE=4 SV=1
Gene Ontology
ID GO:0004672
description l-type lectin-domain containing receptor kinase -like isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02768: 28935-29235
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010904_010 0.0 - - PREDICTED: probable receptor-like protein kinase At5g39030 isoform X2 [Jatropha curcas]
2 Hb_003970_010 0.0700851799 - - PREDICTED: sigma factor binding protein 1, chloroplastic-like [Populus euphratica]
3 Hb_002211_020 0.0844129863 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 5-like [Jatropha curcas]
4 Hb_000732_160 0.1026805473 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
5 Hb_171168_010 0.1136417502 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
6 Hb_008202_010 0.1182169904 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
7 Hb_000110_040 0.1189601124 - - PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 [Jatropha curcas]
8 Hb_029095_010 0.1207613879 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21060 [Jatropha curcas]
9 Hb_000340_380 0.1256819392 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 [Jatropha curcas]
10 Hb_094439_010 0.125704305 - - PREDICTED: MACPF domain-containing protein At1g14780 [Jatropha curcas]
11 Hb_002030_090 0.1261971648 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
12 Hb_064293_010 0.1291644037 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
13 Hb_031685_010 0.1301927087 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
14 Hb_010614_010 0.1314482331 - - leucine-rich repeat transmembrane protein kinase [Populus trichocarpa]
15 Hb_003125_080 0.1314691782 - - PREDICTED: F-box protein At5g50450 [Jatropha curcas]
16 Hb_002155_020 0.1325595396 - - PREDICTED: probable WRKY transcription factor 65 [Jatropha curcas]
17 Hb_029584_110 0.1329377249 transcription factor TF Family: MYB-related PREDICTED: myb-like protein J [Jatropha curcas]
18 Hb_011028_030 0.1333002455 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000031_320 0.1336859104 - - unnamed protein product [Vitis vinifera]
20 Hb_001040_090 0.1369346844 - - PREDICTED: tetraspanin-19-like [Jatropha curcas]

Gene co-expression network

sample Hb_010904_010 Hb_010904_010 Hb_003970_010 Hb_003970_010 Hb_010904_010--Hb_003970_010 Hb_002211_020 Hb_002211_020 Hb_010904_010--Hb_002211_020 Hb_000732_160 Hb_000732_160 Hb_010904_010--Hb_000732_160 Hb_171168_010 Hb_171168_010 Hb_010904_010--Hb_171168_010 Hb_008202_010 Hb_008202_010 Hb_010904_010--Hb_008202_010 Hb_000110_040 Hb_000110_040 Hb_010904_010--Hb_000110_040 Hb_003970_010--Hb_002211_020 Hb_000031_320 Hb_000031_320 Hb_003970_010--Hb_000031_320 Hb_003970_010--Hb_008202_010 Hb_003970_010--Hb_000110_040 Hb_046739_010 Hb_046739_010 Hb_003970_010--Hb_046739_010 Hb_011028_030 Hb_011028_030 Hb_002211_020--Hb_011028_030 Hb_019863_050 Hb_019863_050 Hb_002211_020--Hb_019863_050 Hb_002211_020--Hb_000031_320 Hb_002211_020--Hb_000110_040 Hb_010614_010 Hb_010614_010 Hb_000732_160--Hb_010614_010 Hb_031685_010 Hb_031685_010 Hb_000732_160--Hb_031685_010 Hb_094439_010 Hb_094439_010 Hb_000732_160--Hb_094439_010 Hb_001631_110 Hb_001631_110 Hb_000732_160--Hb_001631_110 Hb_004241_170 Hb_004241_170 Hb_000732_160--Hb_004241_170 Hb_006827_030 Hb_006827_030 Hb_171168_010--Hb_006827_030 Hb_007113_020 Hb_007113_020 Hb_171168_010--Hb_007113_020 Hb_001579_060 Hb_001579_060 Hb_171168_010--Hb_001579_060 Hb_002155_020 Hb_002155_020 Hb_171168_010--Hb_002155_020 Hb_002030_090 Hb_002030_090 Hb_171168_010--Hb_002030_090 Hb_000049_170 Hb_000049_170 Hb_171168_010--Hb_000049_170 Hb_029584_110 Hb_029584_110 Hb_008202_010--Hb_029584_110 Hb_135714_010 Hb_135714_010 Hb_008202_010--Hb_135714_010 Hb_005888_050 Hb_005888_050 Hb_008202_010--Hb_005888_050 Hb_002596_090 Hb_002596_090 Hb_008202_010--Hb_002596_090 Hb_111997_010 Hb_111997_010 Hb_008202_010--Hb_111997_010 Hb_000110_040--Hb_008202_010 Hb_000656_260 Hb_000656_260 Hb_000110_040--Hb_000656_260 Hb_000340_380 Hb_000340_380 Hb_000110_040--Hb_000340_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.26188 2.75617 0.768731 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.460348 2.89816

CAGE analysis