Hb_005888_050

Information

Type -
Description -
Location Contig5888: 51790-59055
Sequence    

Annotation

kegg
ID rcu:RCOM_0560530
description ATP binding protein, putative (EC:2.7.11.30 2.7.11.25)
nr
ID XP_002520279.1
description ATP binding protein, putative [Ricinus communis]
swissprot
ID Q9LMP1
description Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1
trembl
ID B9S2R0
description ATP binding protein, putative OS=Ricinus communis GN=RCOM_0560530 PE=4 SV=1
Gene Ontology
ID GO:0004672
description wall-associated receptor kinase-like 16

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005888_050 0.0 - - ATP binding protein, putative [Ricinus communis]
2 Hb_135714_010 0.0612456657 - - hypothetical protein POPTR_0017s09310g, partial [Populus trichocarpa]
3 Hb_074966_010 0.0761864056 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
4 Hb_001926_020 0.0941981337 - - PREDICTED: glutamate receptor 2.9-like [Jatropha curcas]
5 Hb_008202_010 0.0967124364 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
6 Hb_031685_010 0.0985107789 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
7 Hb_006188_020 0.1014240959 - - PREDICTED: uncharacterized protein LOC105646403 [Jatropha curcas]
8 Hb_111997_010 0.1045237573 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Vitis vinifera]
9 Hb_003337_020 0.1058864626 - - PREDICTED: uncharacterized protein LOC105116455 [Populus euphratica]
10 Hb_000343_050 0.1088019972 - - conserved hypothetical protein [Ricinus communis]
11 Hb_003777_120 0.1159235995 - - -
12 Hb_006789_030 0.1161017979 - - PREDICTED: wall-associated receptor kinase-like 22 [Prunus mume]
13 Hb_032731_010 0.1164779162 - - RING-H2 finger protein ATL5M precursor, putative [Ricinus communis]
14 Hb_007254_010 0.1201893383 - - hypothetical protein JCGZ_25214 [Jatropha curcas]
15 Hb_005227_030 0.1249123498 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Jatropha curcas]
16 Hb_059318_010 0.1256111782 - - glutamate receptor 2 plant, putative [Ricinus communis]
17 Hb_023904_010 0.127831549 - - -
18 Hb_001677_170 0.1303753472 - - hypothetical protein M569_03661, partial [Genlisea aurea]
19 Hb_005486_020 0.1313502532 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT5 [Jatropha curcas]
20 Hb_034585_070 0.1330676551 - - Polyneuridine-aldehyde esterase precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_005888_050 Hb_005888_050 Hb_135714_010 Hb_135714_010 Hb_005888_050--Hb_135714_010 Hb_074966_010 Hb_074966_010 Hb_005888_050--Hb_074966_010 Hb_001926_020 Hb_001926_020 Hb_005888_050--Hb_001926_020 Hb_008202_010 Hb_008202_010 Hb_005888_050--Hb_008202_010 Hb_031685_010 Hb_031685_010 Hb_005888_050--Hb_031685_010 Hb_006188_020 Hb_006188_020 Hb_005888_050--Hb_006188_020 Hb_135714_010--Hb_008202_010 Hb_135714_010--Hb_074966_010 Hb_005227_030 Hb_005227_030 Hb_135714_010--Hb_005227_030 Hb_135714_010--Hb_031685_010 Hb_000343_050 Hb_000343_050 Hb_135714_010--Hb_000343_050 Hb_074966_010--Hb_001926_020 Hb_059318_010 Hb_059318_010 Hb_074966_010--Hb_059318_010 Hb_111997_010 Hb_111997_010 Hb_074966_010--Hb_111997_010 Hb_003777_120 Hb_003777_120 Hb_074966_010--Hb_003777_120 Hb_032731_010 Hb_032731_010 Hb_074966_010--Hb_032731_010 Hb_001926_020--Hb_059318_010 Hb_001926_020--Hb_032731_010 Hb_001926_020--Hb_003777_120 Hb_001926_020--Hb_006188_020 Hb_029584_110 Hb_029584_110 Hb_008202_010--Hb_029584_110 Hb_003970_010 Hb_003970_010 Hb_008202_010--Hb_003970_010 Hb_002596_090 Hb_002596_090 Hb_008202_010--Hb_002596_090 Hb_008202_010--Hb_111997_010 Hb_006789_030 Hb_006789_030 Hb_031685_010--Hb_006789_030 Hb_029095_010 Hb_029095_010 Hb_031685_010--Hb_029095_010 Hb_000732_160 Hb_000732_160 Hb_031685_010--Hb_000732_160 Hb_003337_020 Hb_003337_020 Hb_031685_010--Hb_003337_020 Hb_094439_010 Hb_094439_010 Hb_031685_010--Hb_094439_010 Hb_006188_020--Hb_111997_010 Hb_006188_020--Hb_074966_010 Hb_006188_020--Hb_000343_050 Hb_001677_170 Hb_001677_170 Hb_006188_020--Hb_001677_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0573056 0.142179 0.0281889 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00666934 0.0709941

CAGE analysis