Hb_009403_010

Information

Type -
Description -
Location Contig9403: 26-664
Sequence    

Annotation

kegg
ID rcu:RCOM_0574930
description receptor serine/threonine kinase, putative
nr
ID KDP42829.1
description hypothetical protein JCGZ_23771 [Jatropha curcas]
swissprot
ID D7SFH9
description Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 OS=Arabidopsis thaliana GN=GDPDL2 PE=1 SV=1
trembl
ID A0A067LFF9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23771 PE=3 SV=1
Gene Ontology
ID GO:0004674
description receptor serine threonine

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009403_010 0.0 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
2 Hb_026415_010 0.0966374199 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
3 Hb_004879_030 0.1233234246 - - PREDICTED: uncharacterized protein LOC105124685 [Populus euphratica]
4 Hb_000813_090 0.1305736546 - - hypothetical protein CARUB_v10019318mg [Capsella rubella]
5 Hb_000974_030 0.1326365 - - PREDICTED: uncharacterized protein LOC105128463 isoform X1 [Populus euphratica]
6 Hb_000325_070 0.1367732233 - - ABC transporter family protein [Hevea brasiliensis]
7 Hb_105814_020 0.1385786732 - - berberine bridge enzyme [Hevea brasiliensis]
8 Hb_132259_010 0.1432139829 - - PREDICTED: WAT1-related protein At5g64700 [Jatropha curcas]
9 Hb_004730_010 0.1433822623 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT5 [Jatropha curcas]
10 Hb_115114_010 0.145969243 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000181_390 0.1470356429 - - unknown [Lotus japonicus]
12 Hb_000015_230 0.1531822155 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF3.6-like isoform X2 [Populus euphratica]
13 Hb_100526_020 0.1584124146 - - hypothetical protein POPTR_0003s09340g [Populus trichocarpa]
14 Hb_152414_010 0.1591956859 desease resistance Gene Name: NB-ARC hypothetical protein PRUPE_ppa024232mg [Prunus persica]
15 Hb_001046_040 0.1651273638 - - UDP-glucosyltransferase, putative [Ricinus communis]
16 Hb_003145_030 0.16622662 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000041_160 0.1703063307 - - PREDICTED: uncharacterized protein LOC104907627 [Beta vulgaris subsp. vulgaris]
18 Hb_009557_080 0.1726220665 - - PREDICTED: glutaredoxin-C9-like [Populus euphratica]
19 Hb_000375_150 0.1789624531 - - conserved hypothetical protein [Ricinus communis]
20 Hb_027474_010 0.1801859603 - - PREDICTED: uncharacterized protein LOC105629982 [Jatropha curcas]

Gene co-expression network

sample Hb_009403_010 Hb_009403_010 Hb_026415_010 Hb_026415_010 Hb_009403_010--Hb_026415_010 Hb_004879_030 Hb_004879_030 Hb_009403_010--Hb_004879_030 Hb_000813_090 Hb_000813_090 Hb_009403_010--Hb_000813_090 Hb_000974_030 Hb_000974_030 Hb_009403_010--Hb_000974_030 Hb_000325_070 Hb_000325_070 Hb_009403_010--Hb_000325_070 Hb_105814_020 Hb_105814_020 Hb_009403_010--Hb_105814_020 Hb_026415_010--Hb_000325_070 Hb_026415_010--Hb_004879_030 Hb_026415_010--Hb_000813_090 Hb_115114_010 Hb_115114_010 Hb_026415_010--Hb_115114_010 Hb_152414_010 Hb_152414_010 Hb_026415_010--Hb_152414_010 Hb_004879_030--Hb_152414_010 Hb_004879_030--Hb_115114_010 Hb_004879_030--Hb_000325_070 Hb_009557_080 Hb_009557_080 Hb_004879_030--Hb_009557_080 Hb_006358_030 Hb_006358_030 Hb_004879_030--Hb_006358_030 Hb_001046_040 Hb_001046_040 Hb_000813_090--Hb_001046_040 Hb_000813_090--Hb_115114_010 Hb_044624_010 Hb_044624_010 Hb_000813_090--Hb_044624_010 Hb_000813_090--Hb_009557_080 Hb_000041_160 Hb_000041_160 Hb_000813_090--Hb_000041_160 Hb_100526_020 Hb_100526_020 Hb_000974_030--Hb_100526_020 Hb_003145_030 Hb_003145_030 Hb_000974_030--Hb_003145_030 Hb_005048_090 Hb_005048_090 Hb_000974_030--Hb_005048_090 Hb_000096_050 Hb_000096_050 Hb_000974_030--Hb_000096_050 Hb_000181_390 Hb_000181_390 Hb_000974_030--Hb_000181_390 Hb_005694_150 Hb_005694_150 Hb_000325_070--Hb_005694_150 Hb_000375_150 Hb_000375_150 Hb_000325_070--Hb_000375_150 Hb_004724_300 Hb_004724_300 Hb_000325_070--Hb_004724_300 Hb_000015_230 Hb_000015_230 Hb_000325_070--Hb_000015_230 Hb_123078_010 Hb_123078_010 Hb_105814_020--Hb_123078_010 Hb_105814_020--Hb_000041_160 Hb_004730_010 Hb_004730_010 Hb_105814_020--Hb_004730_010 Hb_027474_010 Hb_027474_010 Hb_105814_020--Hb_027474_010 Hb_002267_030 Hb_002267_030 Hb_105814_020--Hb_002267_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.24347 0.185184 0.578116 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.648694

CAGE analysis