Hb_002267_030

Information

Type -
Description -
Location Contig2267: 45139-49250
Sequence    

Annotation

kegg
ID cic:CICLE_v10025077mg
description hypothetical protein
nr
ID KDP40884.1
description hypothetical protein JCGZ_24883 [Jatropha curcas]
swissprot
ID Q9C7A2
description Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana GN=At3g12360 PE=2 SV=1
trembl
ID A0A067L9U3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24883 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002267_030 0.0 - - hypothetical protein JCGZ_24883 [Jatropha curcas]
2 Hb_005714_140 0.0924228675 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
3 Hb_000260_130 0.098222012 - - Acid phosphatase 1 precursor, putative [Ricinus communis]
4 Hb_123078_010 0.1044088078 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
5 Hb_008550_030 0.1054084709 - - PREDICTED: tonoplast dicarboxylate transporter [Jatropha curcas]
6 Hb_105814_020 0.1060747791 - - berberine bridge enzyme [Hevea brasiliensis]
7 Hb_002820_090 0.1078100172 - - PREDICTED: WAT1-related protein At1g21890-like [Jatropha curcas]
8 Hb_011101_010 0.1190552517 - - hypothetical protein JCGZ_25132 [Jatropha curcas]
9 Hb_002236_020 0.124199074 - - PREDICTED: nephrocystin-3 [Jatropha curcas]
10 Hb_002097_210 0.1352238472 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001814_100 0.1371189942 - - PREDICTED: uncharacterized protein LOC105119066 [Populus euphratica]
12 Hb_004218_290 0.1384165448 transcription factor TF Family: SRS PREDICTED: protein SHI RELATED SEQUENCE 6 isoform X2 [Jatropha curcas]
13 Hb_000252_190 0.1437200433 - - PREDICTED: uncharacterized protein LOC105644975 [Jatropha curcas]
14 Hb_027474_010 0.1516283745 - - PREDICTED: uncharacterized protein LOC105629982 [Jatropha curcas]
15 Hb_145139_010 0.1525584207 - - PREDICTED: sugar transporter ERD6-like 5 isoform X1 [Vitis vinifera]
16 Hb_000060_100 0.1539245756 transcription factor TF Family: OFP conserved hypothetical protein [Ricinus communis]
17 Hb_003376_150 0.1542250112 - - PREDICTED: peroxidase 21 [Jatropha curcas]
18 Hb_009786_010 0.15506182 - - Phosphoprotein phosphatase [Theobroma cacao]
19 Hb_161045_010 0.1587879461 - - hypothetical protein JCGZ_15100 [Jatropha curcas]
20 Hb_009787_020 0.1602485036 - - PREDICTED: cytochrome P450 705A5-like [Jatropha curcas]

Gene co-expression network

sample Hb_002267_030 Hb_002267_030 Hb_005714_140 Hb_005714_140 Hb_002267_030--Hb_005714_140 Hb_000260_130 Hb_000260_130 Hb_002267_030--Hb_000260_130 Hb_123078_010 Hb_123078_010 Hb_002267_030--Hb_123078_010 Hb_008550_030 Hb_008550_030 Hb_002267_030--Hb_008550_030 Hb_105814_020 Hb_105814_020 Hb_002267_030--Hb_105814_020 Hb_002820_090 Hb_002820_090 Hb_002267_030--Hb_002820_090 Hb_005714_140--Hb_000260_130 Hb_000252_190 Hb_000252_190 Hb_005714_140--Hb_000252_190 Hb_005714_140--Hb_002820_090 Hb_004242_160 Hb_004242_160 Hb_005714_140--Hb_004242_160 Hb_000060_100 Hb_000060_100 Hb_005714_140--Hb_000060_100 Hb_161045_010 Hb_161045_010 Hb_000260_130--Hb_161045_010 Hb_000260_130--Hb_004242_160 Hb_007305_040 Hb_007305_040 Hb_000260_130--Hb_007305_040 Hb_001511_270 Hb_001511_270 Hb_000260_130--Hb_001511_270 Hb_000041_160 Hb_000041_160 Hb_123078_010--Hb_000041_160 Hb_123078_010--Hb_105814_020 Hb_027474_010 Hb_027474_010 Hb_123078_010--Hb_027474_010 Hb_011101_010 Hb_011101_010 Hb_123078_010--Hb_011101_010 Hb_004218_290 Hb_004218_290 Hb_123078_010--Hb_004218_290 Hb_002097_210 Hb_002097_210 Hb_008550_030--Hb_002097_210 Hb_004945_050 Hb_004945_050 Hb_008550_030--Hb_004945_050 Hb_002341_040 Hb_002341_040 Hb_008550_030--Hb_002341_040 Hb_030370_070 Hb_030370_070 Hb_008550_030--Hb_030370_070 Hb_008550_030--Hb_000060_100 Hb_105814_020--Hb_000041_160 Hb_004730_010 Hb_004730_010 Hb_105814_020--Hb_004730_010 Hb_105814_020--Hb_027474_010 Hb_009403_010 Hb_009403_010 Hb_105814_020--Hb_009403_010 Hb_002820_090--Hb_000260_130 Hb_009787_020 Hb_009787_020 Hb_002820_090--Hb_009787_020 Hb_002422_030 Hb_002422_030 Hb_002820_090--Hb_002422_030 Hb_000087_180 Hb_000087_180 Hb_002820_090--Hb_000087_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.18747 0.217585 1.34005 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.144256 0.602062

CAGE analysis