Hb_000252_190

Information

Type -
Description -
Location Contig252: 158499-158825
Sequence    

Annotation

kegg
ID cit:102611595
description hypothetical protein
nr
ID XP_012085871.1
description PREDICTED: uncharacterized protein LOC105644975 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JRX4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17805 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000252_190 0.0 - - PREDICTED: uncharacterized protein LOC105644975 [Jatropha curcas]
2 Hb_002236_020 0.0773303935 - - PREDICTED: nephrocystin-3 [Jatropha curcas]
3 Hb_024857_010 0.0952386781 - - glutaredoxin 2.1 [Hevea brasiliensis]
4 Hb_087468_010 0.1011082584 - - PREDICTED: uncharacterized protein LOC100246093 [Vitis vinifera]
5 Hb_005714_140 0.1143245966 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
6 Hb_003800_010 0.1148785274 - - PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Jatropha curcas]
7 Hb_000656_370 0.118869683 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
8 Hb_011101_010 0.1213113522 - - hypothetical protein JCGZ_25132 [Jatropha curcas]
9 Hb_029238_020 0.1247298033 - - PREDICTED: expansin-like A1 [Jatropha curcas]
10 Hb_006573_060 0.1263844498 - - hypothetical protein [Bruguiera gymnorhiza]
11 Hb_001568_120 0.1286065789 - - hypothetical protein JCGZ_05918 [Jatropha curcas]
12 Hb_001897_030 0.1291232387 - - PREDICTED: actin-depolymerizing factor 5 [Jatropha curcas]
13 Hb_000260_130 0.1297829918 - - Acid phosphatase 1 precursor, putative [Ricinus communis]
14 Hb_000417_230 0.1319206872 - - conserved hypothetical protein [Ricinus communis]
15 Hb_002239_030 0.1342472143 transcription factor TF Family: ARF PREDICTED: auxin response factor 4 [Jatropha curcas]
16 Hb_007305_040 0.1367333664 - - Nodulin-26, putative [Ricinus communis]
17 Hb_005389_090 0.1413516588 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA27, putative [Ricinus communis]
18 Hb_000723_060 0.1433609569 - - PREDICTED: uncharacterized protein LOC105642243 [Jatropha curcas]
19 Hb_002267_030 0.1437200433 - - hypothetical protein JCGZ_24883 [Jatropha curcas]
20 Hb_000000_070 0.1443490496 - - allene oxide synthase [Hevea brasiliensis]

Gene co-expression network

sample Hb_000252_190 Hb_000252_190 Hb_002236_020 Hb_002236_020 Hb_000252_190--Hb_002236_020 Hb_024857_010 Hb_024857_010 Hb_000252_190--Hb_024857_010 Hb_087468_010 Hb_087468_010 Hb_000252_190--Hb_087468_010 Hb_005714_140 Hb_005714_140 Hb_000252_190--Hb_005714_140 Hb_003800_010 Hb_003800_010 Hb_000252_190--Hb_003800_010 Hb_000656_370 Hb_000656_370 Hb_000252_190--Hb_000656_370 Hb_002236_020--Hb_024857_010 Hb_002236_020--Hb_000656_370 Hb_007305_040 Hb_007305_040 Hb_002236_020--Hb_007305_040 Hb_004122_020 Hb_004122_020 Hb_002236_020--Hb_004122_020 Hb_002968_010 Hb_002968_010 Hb_002236_020--Hb_002968_010 Hb_024857_010--Hb_087468_010 Hb_024857_010--Hb_000656_370 Hb_002239_030 Hb_002239_030 Hb_024857_010--Hb_002239_030 Hb_000101_140 Hb_000101_140 Hb_024857_010--Hb_000101_140 Hb_000111_150 Hb_000111_150 Hb_087468_010--Hb_000111_150 Hb_001897_030 Hb_001897_030 Hb_087468_010--Hb_001897_030 Hb_132517_010 Hb_132517_010 Hb_087468_010--Hb_132517_010 Hb_005396_110 Hb_005396_110 Hb_087468_010--Hb_005396_110 Hb_000260_130 Hb_000260_130 Hb_005714_140--Hb_000260_130 Hb_002267_030 Hb_002267_030 Hb_005714_140--Hb_002267_030 Hb_002820_090 Hb_002820_090 Hb_005714_140--Hb_002820_090 Hb_004242_160 Hb_004242_160 Hb_005714_140--Hb_004242_160 Hb_000060_100 Hb_000060_100 Hb_005714_140--Hb_000060_100 Hb_004143_050 Hb_004143_050 Hb_003800_010--Hb_004143_050 Hb_003800_010--Hb_087468_010 Hb_000417_230 Hb_000417_230 Hb_003800_010--Hb_000417_230 Hb_052113_020 Hb_052113_020 Hb_003800_010--Hb_052113_020 Hb_005687_060 Hb_005687_060 Hb_003800_010--Hb_005687_060 Hb_000656_370--Hb_002968_010 Hb_000656_370--Hb_000101_140 Hb_145139_010 Hb_145139_010 Hb_000656_370--Hb_145139_010 Hb_000656_370--Hb_004122_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.171497 242.387 29.4101 120.994 0.362291 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.478381 0 18.5846 15.4739

CAGE analysis