Hb_000111_150

Information

Type -
Description -
Location Contig111: 169463-177936
Sequence    

Annotation

kegg
ID rcu:RCOM_1113060
description leucine-rich repeat receptor protein kinase exs precursor, putative (EC:1.3.1.74)
nr
ID XP_011020398.1
description PREDICTED: receptor-like protein 12 [Populus euphratica]
swissprot
ID Q9LYN8
description Leucine-rich repeat receptor protein kinase EMS1 OS=Arabidopsis thaliana GN=EMS1 PE=1 SV=1
trembl
ID B9T0F6
description Leucine-rich repeat receptor protein kinase exs, putative OS=Ricinus communis GN=RCOM_1113060 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000111_150 0.0 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
2 Hb_005605_030 0.0901377674 - - hypothetical protein JCGZ_01308 [Jatropha curcas]
3 Hb_005396_110 0.0924334548 - - conserved hypothetical protein [Ricinus communis]
4 Hb_087468_010 0.0985921637 - - PREDICTED: uncharacterized protein LOC100246093 [Vitis vinifera]
5 Hb_000509_040 0.1044085068 - - hypothetical protein VITISV_009716 [Vitis vinifera]
6 Hb_000028_360 0.1206275496 - - ubiquitin-protein ligase, putative [Ricinus communis]
7 Hb_132517_010 0.1334801017 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like isoform X3 [Populus euphratica]
8 Hb_001897_030 0.1342369486 - - PREDICTED: actin-depolymerizing factor 5 [Jatropha curcas]
9 Hb_024857_010 0.1379723984 - - glutaredoxin 2.1 [Hevea brasiliensis]
10 Hb_001131_100 0.1433312324 - - PREDICTED: uncharacterized protein LOC105638386 [Jatropha curcas]
11 Hb_000252_190 0.1454178573 - - PREDICTED: uncharacterized protein LOC105644975 [Jatropha curcas]
12 Hb_002922_010 0.1466650578 - - heavy-metal-associated domain-containing family protein [Populus trichocarpa]
13 Hb_011928_030 0.14929376 - - PREDICTED: probable calcium-binding protein CML23 [Jatropha curcas]
14 Hb_001168_100 0.1497531865 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Citrus sinensis]
15 Hb_004195_030 0.1525995579 - - hypothetical protein POPTR_0006s17880g, partial [Populus trichocarpa]
16 Hb_000417_230 0.1541572288 - - conserved hypothetical protein [Ricinus communis]
17 Hb_094839_010 0.1551797398 - - conserved hypothetical protein [Ricinus communis]
18 Hb_007728_010 0.155771745 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
19 Hb_000134_010 0.1599255994 - - -
20 Hb_010573_030 0.1607402293 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000111_150 Hb_000111_150 Hb_005605_030 Hb_005605_030 Hb_000111_150--Hb_005605_030 Hb_005396_110 Hb_005396_110 Hb_000111_150--Hb_005396_110 Hb_087468_010 Hb_087468_010 Hb_000111_150--Hb_087468_010 Hb_000509_040 Hb_000509_040 Hb_000111_150--Hb_000509_040 Hb_000028_360 Hb_000028_360 Hb_000111_150--Hb_000028_360 Hb_132517_010 Hb_132517_010 Hb_000111_150--Hb_132517_010 Hb_007407_010 Hb_007407_010 Hb_005605_030--Hb_007407_010 Hb_005605_030--Hb_000509_040 Hb_005605_030--Hb_000028_360 Hb_000133_060 Hb_000133_060 Hb_005605_030--Hb_000133_060 Hb_002922_010 Hb_002922_010 Hb_005605_030--Hb_002922_010 Hb_005396_110--Hb_000509_040 Hb_005396_110--Hb_132517_010 Hb_001059_050 Hb_001059_050 Hb_005396_110--Hb_001059_050 Hb_001897_030 Hb_001897_030 Hb_005396_110--Hb_001897_030 Hb_005396_110--Hb_087468_010 Hb_024857_010 Hb_024857_010 Hb_087468_010--Hb_024857_010 Hb_000252_190 Hb_000252_190 Hb_087468_010--Hb_000252_190 Hb_087468_010--Hb_001897_030 Hb_087468_010--Hb_132517_010 Hb_000509_040--Hb_001897_030 Hb_002049_030 Hb_002049_030 Hb_000509_040--Hb_002049_030 Hb_000509_040--Hb_132517_010 Hb_041534_010 Hb_041534_010 Hb_000028_360--Hb_041534_010 Hb_006916_220 Hb_006916_220 Hb_000028_360--Hb_006916_220 Hb_013591_010 Hb_013591_010 Hb_000028_360--Hb_013591_010 Hb_002422_020 Hb_002422_020 Hb_000028_360--Hb_002422_020 Hb_000731_020 Hb_000731_020 Hb_000028_360--Hb_000731_020 Hb_005389_090 Hb_005389_090 Hb_132517_010--Hb_005389_090 Hb_132517_010--Hb_001059_050 Hb_132517_010--Hb_001897_030 Hb_151616_010 Hb_151616_010 Hb_132517_010--Hb_151616_010 Hb_001227_010 Hb_001227_010 Hb_132517_010--Hb_001227_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00507718 1.64175 0.164917 0.675749 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.118872 0

CAGE analysis