Hb_006916_220

Information

Type -
Description -
Location Contig6916: 201455-204074
Sequence    

Annotation

kegg
ID sot:102596431
description receptor-like protein kinase HERK 1-like
nr
ID KDP27679.1
description hypothetical protein JCGZ_20099 [Jatropha curcas]
swissprot
ID P0DH62
description Inactive protein kinase SELMODRAFT_444075 OS=Selaginella moellendorffii GN=SELMODRAFT_444075 PE=2 SV=1
trembl
ID A0A067K7A1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20099 PE=4 SV=1
Gene Ontology
ID GO:0016301
description receptor-like protein kinase feronia

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006916_220 0.0 - - hypothetical protein JCGZ_20099 [Jatropha curcas]
2 Hb_004724_290 0.0651436726 transcription factor TF Family: NAC -
3 Hb_004724_310 0.0717683072 transcription factor TF Family: MYB-related PREDICTED: transcription factor DIVARICATA-like [Jatropha curcas]
4 Hb_002006_110 0.0808028419 transcription factor TF Family: LFY LEAFY-like protein [Pistacia chinensis]
5 Hb_019978_010 0.0814553901 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
6 Hb_010136_020 0.0824600329 - - stress-induced receptor-like kinase [Medicago truncatula]
7 Hb_184752_010 0.085600313 - - PREDICTED: uncharacterized protein LOC105642593 [Jatropha curcas]
8 Hb_000373_220 0.0932286834 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
9 Hb_036754_040 0.0955716612 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
10 Hb_000731_020 0.0982568896 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT10-like [Jatropha curcas]
11 Hb_000028_360 0.1002790301 - - ubiquitin-protein ligase, putative [Ricinus communis]
12 Hb_000996_100 0.1007042552 - - Nucleotide binding, putative [Theobroma cacao]
13 Hb_011429_010 0.1019131106 - - hypothetical protein POPTR_0188s00230g [Populus trichocarpa]
14 Hb_001677_140 0.1048354655 - - PREDICTED: uncharacterized protein LOC102622520 isoform X1 [Citrus sinensis]
15 Hb_001511_200 0.1074300845 - - Embryonic abundant protein, putative [Ricinus communis]
16 Hb_000769_030 0.1111517701 - - ankyrin repeat-containing protein, putative [Ricinus communis]
17 Hb_053935_010 0.111848979 - - hypothetical protein EUGRSUZ_G02294 [Eucalyptus grandis]
18 Hb_158110_010 0.112455811 - - hypothetical protein CICLE_v10012017mg [Citrus clementina]
19 Hb_008963_010 0.1175669686 desease resistance Gene Name: LRR_4 PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
20 Hb_000668_220 0.1210945644 - - PREDICTED: uncharacterized protein LOC105119281 [Populus euphratica]

Gene co-expression network

sample Hb_006916_220 Hb_006916_220 Hb_004724_290 Hb_004724_290 Hb_006916_220--Hb_004724_290 Hb_004724_310 Hb_004724_310 Hb_006916_220--Hb_004724_310 Hb_002006_110 Hb_002006_110 Hb_006916_220--Hb_002006_110 Hb_019978_010 Hb_019978_010 Hb_006916_220--Hb_019978_010 Hb_010136_020 Hb_010136_020 Hb_006916_220--Hb_010136_020 Hb_184752_010 Hb_184752_010 Hb_006916_220--Hb_184752_010 Hb_004724_290--Hb_019978_010 Hb_004724_290--Hb_002006_110 Hb_011429_010 Hb_011429_010 Hb_004724_290--Hb_011429_010 Hb_004724_290--Hb_010136_020 Hb_004724_290--Hb_184752_010 Hb_000996_100 Hb_000996_100 Hb_004724_310--Hb_000996_100 Hb_008963_010 Hb_008963_010 Hb_004724_310--Hb_008963_010 Hb_000925_110 Hb_000925_110 Hb_004724_310--Hb_000925_110 Hb_000731_020 Hb_000731_020 Hb_004724_310--Hb_000731_020 Hb_000714_080 Hb_000714_080 Hb_004724_310--Hb_000714_080 Hb_002006_110--Hb_010136_020 Hb_036754_040 Hb_036754_040 Hb_002006_110--Hb_036754_040 Hb_001677_140 Hb_001677_140 Hb_002006_110--Hb_001677_140 Hb_002006_110--Hb_019978_010 Hb_002006_110--Hb_184752_010 Hb_019978_010--Hb_010136_020 Hb_019978_010--Hb_036754_040 Hb_019978_010--Hb_184752_010 Hb_010136_020--Hb_036754_040 Hb_010136_020--Hb_001677_140 Hb_010136_020--Hb_184752_010 Hb_034581_010 Hb_034581_010 Hb_010136_020--Hb_034581_010 Hb_184752_010--Hb_036754_040 Hb_184752_010--Hb_001677_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.491923 0.201755 0.275779 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00723048 0

CAGE analysis