Hb_184752_010

Information

Type -
Description -
Location Contig184752: 67-495
Sequence    

Annotation

kegg
ID rcu:RCOM_1347870
description hypothetical protein
nr
ID XP_012082856.1
description PREDICTED: uncharacterized protein LOC105642593 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JZP3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13999 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_184752_010 0.0 - - PREDICTED: uncharacterized protein LOC105642593 [Jatropha curcas]
2 Hb_002006_110 0.0620086908 transcription factor TF Family: LFY LEAFY-like protein [Pistacia chinensis]
3 Hb_010136_020 0.0632013609 - - stress-induced receptor-like kinase [Medicago truncatula]
4 Hb_004724_290 0.0668891158 transcription factor TF Family: NAC -
5 Hb_036754_040 0.0741293122 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
6 Hb_019978_010 0.0747594592 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
7 Hb_001677_140 0.0845270051 - - PREDICTED: uncharacterized protein LOC102622520 isoform X1 [Citrus sinensis]
8 Hb_006916_220 0.085600313 - - hypothetical protein JCGZ_20099 [Jatropha curcas]
9 Hb_001511_200 0.0970076655 - - Embryonic abundant protein, putative [Ricinus communis]
10 Hb_034581_010 0.0986060144 - - PREDICTED: acidic mammalian chitinase-like [Jatropha curcas]
11 Hb_000731_020 0.1008356239 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT10-like [Jatropha curcas]
12 Hb_000373_220 0.1070642223 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
13 Hb_128851_020 0.1079343278 - - ankyrin repeat-containing protein, putative [Ricinus communis]
14 Hb_004724_310 0.1109489799 transcription factor TF Family: MYB-related PREDICTED: transcription factor DIVARICATA-like [Jatropha curcas]
15 Hb_011429_010 0.1152687634 - - hypothetical protein POPTR_0188s00230g [Populus trichocarpa]
16 Hb_110356_010 0.1161878623 - - hypothetical protein JCGZ_21614 [Jatropha curcas]
17 Hb_013591_010 0.1202922914 - - Mitogen-activated protein kinase kinase kinase 1 [Glycine soja]
18 Hb_002422_020 0.1245582 - - PREDICTED: E3 ubiquitin-protein ligase UPL5 [Jatropha curcas]
19 Hb_187620_010 0.1259332201 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
20 Hb_000769_030 0.1280649364 - - ankyrin repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_184752_010 Hb_184752_010 Hb_002006_110 Hb_002006_110 Hb_184752_010--Hb_002006_110 Hb_010136_020 Hb_010136_020 Hb_184752_010--Hb_010136_020 Hb_004724_290 Hb_004724_290 Hb_184752_010--Hb_004724_290 Hb_036754_040 Hb_036754_040 Hb_184752_010--Hb_036754_040 Hb_019978_010 Hb_019978_010 Hb_184752_010--Hb_019978_010 Hb_001677_140 Hb_001677_140 Hb_184752_010--Hb_001677_140 Hb_002006_110--Hb_010136_020 Hb_002006_110--Hb_036754_040 Hb_002006_110--Hb_001677_140 Hb_002006_110--Hb_019978_010 Hb_002006_110--Hb_004724_290 Hb_010136_020--Hb_036754_040 Hb_010136_020--Hb_001677_140 Hb_010136_020--Hb_019978_010 Hb_034581_010 Hb_034581_010 Hb_010136_020--Hb_034581_010 Hb_004724_290--Hb_019978_010 Hb_011429_010 Hb_011429_010 Hb_004724_290--Hb_011429_010 Hb_006916_220 Hb_006916_220 Hb_004724_290--Hb_006916_220 Hb_004724_290--Hb_010136_020 Hb_036754_040--Hb_001677_140 Hb_036754_040--Hb_034581_010 Hb_036754_040--Hb_019978_010 Hb_110356_010 Hb_110356_010 Hb_036754_040--Hb_110356_010 Hb_019978_010--Hb_006916_220 Hb_128851_020 Hb_128851_020 Hb_001677_140--Hb_128851_020 Hb_001677_140--Hb_110356_010 Hb_001677_140--Hb_034581_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 39.7045 16.0127 19.4596 0 0.182736
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.27466 0 0 0

CAGE analysis