Hb_007407_010

Information

Type transcription factor
Description TF Family: WRKY
Location Contig7407: 18667-20886
Sequence    

Annotation

kegg
ID pop:POPTR_0013s03990g
description POPTRDRAFT_571055; WRKY transcription factor 39 family protein
nr
ID XP_011038553.1
description PREDICTED: probable WRKY transcription factor 74 [Populus euphratica]
swissprot
ID Q93WU6
description Probable WRKY transcription factor 74 OS=Arabidopsis thaliana GN=WRKY74 PE=2 SV=2
trembl
ID S5CKG9
description Uncharacterized protein OS=Jatropha curcas GN=WRKY40 PE=4 SV=1
Gene Ontology
ID GO:0003700
description probable wrky transcription factor 21

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007407_010 0.0 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 74 [Populus euphratica]
2 Hb_000133_060 0.0771566368 - - PREDICTED: protein YLS9-like [Jatropha curcas]
3 Hb_005605_030 0.0919577348 - - hypothetical protein JCGZ_01308 [Jatropha curcas]
4 Hb_000110_330 0.0998569704 - - PREDICTED: probable nitrite transporter At1g68570-like [Glycine max]
5 Hb_002205_260 0.1023928026 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]
6 Hb_009683_010 0.1067877802 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
7 Hb_012545_080 0.1090348721 - - PREDICTED: uncharacterized protein LOC105633680 [Jatropha curcas]
8 Hb_018043_010 0.1117711884 - - PREDICTED: auxin-induced protein 15A-like [Jatropha curcas]
9 Hb_133845_010 0.1150165455 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
10 Hb_012404_050 0.1229181551 - - PREDICTED: uncharacterized protein LOC101496717 [Cicer arietinum]
11 Hb_041145_010 0.1338156991 - - hypothetical protein CISIN_1g021653mg [Citrus sinensis]
12 Hb_001289_030 0.1384009993 - - syntaxin, plant, putative [Ricinus communis]
13 Hb_001568_120 0.1404145867 - - hypothetical protein JCGZ_05918 [Jatropha curcas]
14 Hb_174380_010 0.1434380384 - - kinase, putative [Ricinus communis]
15 Hb_003582_020 0.1451977139 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Eucalyptus grandis]
16 Hb_000509_040 0.1485072482 - - hypothetical protein VITISV_009716 [Vitis vinifera]
17 Hb_005357_270 0.1497141431 - - Glucose-6-phosphate/phosphate translocator 2, chloroplast precursor, putative [Ricinus communis]
18 Hb_127400_010 0.1506641464 desease resistance Gene Name: NB-ARC phosphoprotein phosphatase, putative [Ricinus communis]
19 Hb_019654_010 0.1527694095 - - multicopper oxidase, putative [Ricinus communis]
20 Hb_117127_010 0.1539560468 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH106 [Jatropha curcas]

Gene co-expression network

sample Hb_007407_010 Hb_007407_010 Hb_000133_060 Hb_000133_060 Hb_007407_010--Hb_000133_060 Hb_005605_030 Hb_005605_030 Hb_007407_010--Hb_005605_030 Hb_000110_330 Hb_000110_330 Hb_007407_010--Hb_000110_330 Hb_002205_260 Hb_002205_260 Hb_007407_010--Hb_002205_260 Hb_009683_010 Hb_009683_010 Hb_007407_010--Hb_009683_010 Hb_012545_080 Hb_012545_080 Hb_007407_010--Hb_012545_080 Hb_000133_060--Hb_002205_260 Hb_000133_060--Hb_000110_330 Hb_000133_060--Hb_012545_080 Hb_019961_010 Hb_019961_010 Hb_000133_060--Hb_019961_010 Hb_174380_010 Hb_174380_010 Hb_000133_060--Hb_174380_010 Hb_000111_150 Hb_000111_150 Hb_005605_030--Hb_000111_150 Hb_000509_040 Hb_000509_040 Hb_005605_030--Hb_000509_040 Hb_000028_360 Hb_000028_360 Hb_005605_030--Hb_000028_360 Hb_005605_030--Hb_000133_060 Hb_002922_010 Hb_002922_010 Hb_005605_030--Hb_002922_010 Hb_012404_050 Hb_012404_050 Hb_000110_330--Hb_012404_050 Hb_041145_010 Hb_041145_010 Hb_000110_330--Hb_041145_010 Hb_000110_330--Hb_012545_080 Hb_005357_270 Hb_005357_270 Hb_000110_330--Hb_005357_270 Hb_002205_260--Hb_012545_080 Hb_001289_030 Hb_001289_030 Hb_002205_260--Hb_001289_030 Hb_002660_090 Hb_002660_090 Hb_002205_260--Hb_002660_090 Hb_089140_020 Hb_089140_020 Hb_002205_260--Hb_089140_020 Hb_009683_010--Hb_001289_030 Hb_009683_010--Hb_012545_080 Hb_001568_120 Hb_001568_120 Hb_009683_010--Hb_001568_120 Hb_003582_020 Hb_003582_020 Hb_009683_010--Hb_003582_020 Hb_001411_150 Hb_001411_150 Hb_009683_010--Hb_001411_150 Hb_000996_200 Hb_000996_200 Hb_012545_080--Hb_000996_200 Hb_012545_080--Hb_005357_270 Hb_012545_080--Hb_012404_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.150153 0.0396217 0.0385636 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0223173 0

CAGE analysis