Hb_003582_020

Information

Type -
Description -
Location Contig3582: 43831-46419
Sequence    

Annotation

kegg
ID egr:104435400
description non-functional NADPH-dependent codeinone reductase 2-like
nr
ID XP_010046459.1
description PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Eucalyptus grandis]
swissprot
ID Q9SQ69
description NADPH-dependent codeinone reductase 1-2 OS=Papaver somniferum GN=COR1.2 PE=1 SV=1
trembl
ID A0A061E5N1
description NAD(P)-linked oxidoreductase superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_010152 PE=4 SV=1
Gene Ontology
ID GO:0016491
description non-functional nadph-dependent codeinone reductase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 044_G12.ab1: 43650-45686

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003582_020 0.0 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Eucalyptus grandis]
2 Hb_001289_030 0.0912262469 - - syntaxin, plant, putative [Ricinus communis]
3 Hb_025477_020 0.0942088194 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF027 [Jatropha curcas]
4 Hb_002922_010 0.0968839159 - - heavy-metal-associated domain-containing family protein [Populus trichocarpa]
5 Hb_035391_010 0.0976951962 - - TMV resistance protein N, putative [Ricinus communis]
6 Hb_136027_010 0.1016468992 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_26658 [Jatropha curcas]
7 Hb_001411_150 0.1041486438 - - Dormancy/auxin associated family protein, putative [Theobroma cacao]
8 Hb_125201_010 0.107360061 - - hypothetical protein POPTR_0004s03690g [Populus trichocarpa]
9 Hb_005618_020 0.1101205774 - - hypothetical protein RCOM_1342750 [Ricinus communis]
10 Hb_019654_010 0.1155127217 - - multicopper oxidase, putative [Ricinus communis]
11 Hb_009683_010 0.1164939199 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
12 Hb_009707_010 0.1168699132 - - PREDICTED: LOW QUALITY PROTEIN: exocyst complex component EXO70B1-like [Jatropha curcas]
13 Hb_000086_600 0.1220712125 - - -
14 Hb_001846_040 0.1229416009 - - cytochrome P450, putative [Ricinus communis]
15 Hb_114932_010 0.1232497077 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
16 Hb_007383_050 0.1237428904 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF061 [Jatropha curcas]
17 Hb_117602_010 0.1237963074 - - dimethylaniline monooxygenase, putative [Ricinus communis]
18 Hb_002660_090 0.1307149312 - - hypothetical protein JCGZ_16500 [Jatropha curcas]
19 Hb_005605_030 0.130740908 - - hypothetical protein JCGZ_01308 [Jatropha curcas]
20 Hb_002205_260 0.1337841992 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]

Gene co-expression network

sample Hb_003582_020 Hb_003582_020 Hb_001289_030 Hb_001289_030 Hb_003582_020--Hb_001289_030 Hb_025477_020 Hb_025477_020 Hb_003582_020--Hb_025477_020 Hb_002922_010 Hb_002922_010 Hb_003582_020--Hb_002922_010 Hb_035391_010 Hb_035391_010 Hb_003582_020--Hb_035391_010 Hb_136027_010 Hb_136027_010 Hb_003582_020--Hb_136027_010 Hb_001411_150 Hb_001411_150 Hb_003582_020--Hb_001411_150 Hb_009683_010 Hb_009683_010 Hb_001289_030--Hb_009683_010 Hb_001289_030--Hb_001411_150 Hb_009189_010 Hb_009189_010 Hb_001289_030--Hb_009189_010 Hb_001289_030--Hb_025477_020 Hb_007383_050 Hb_007383_050 Hb_001289_030--Hb_007383_050 Hb_025477_020--Hb_002922_010 Hb_000210_150 Hb_000210_150 Hb_025477_020--Hb_000210_150 Hb_009707_010 Hb_009707_010 Hb_025477_020--Hb_009707_010 Hb_001477_080 Hb_001477_080 Hb_025477_020--Hb_001477_080 Hb_010417_120 Hb_010417_120 Hb_002922_010--Hb_010417_120 Hb_002922_010--Hb_001477_080 Hb_041534_010 Hb_041534_010 Hb_002922_010--Hb_041534_010 Hb_125201_010 Hb_125201_010 Hb_002922_010--Hb_125201_010 Hb_035391_010--Hb_000210_150 Hb_035391_010--Hb_025477_020 Hb_055706_010 Hb_055706_010 Hb_035391_010--Hb_055706_010 Hb_035391_010--Hb_136027_010 Hb_002311_490 Hb_002311_490 Hb_035391_010--Hb_002311_490 Hb_016404_010 Hb_016404_010 Hb_136027_010--Hb_016404_010 Hb_009247_020 Hb_009247_020 Hb_136027_010--Hb_009247_020 Hb_001846_040 Hb_001846_040 Hb_136027_010--Hb_001846_040 Hb_000796_200 Hb_000796_200 Hb_136027_010--Hb_000796_200 Hb_001411_150--Hb_007383_050 Hb_001411_150--Hb_009189_010 Hb_004267_070 Hb_004267_070 Hb_001411_150--Hb_004267_070 Hb_001168_100 Hb_001168_100 Hb_001411_150--Hb_001168_100 Hb_089140_020 Hb_089140_020 Hb_001411_150--Hb_089140_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.459688 159.821 31.7413 32.1844 1.01147 0.469844
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 6.25608 0.555419

CAGE analysis