Hb_007383_050

Information

Type transcription factor
Description TF Family: ERF
Location Contig7383: 80331-81290
Sequence    

Annotation

kegg
ID rcu:RCOM_1691830
description DNA binding protein, putative
nr
ID XP_012086732.1
description PREDICTED: ethylene-responsive transcription factor ERF061 [Jatropha curcas]
swissprot
ID Q9C7W2
description Ethylene-responsive transcription factor ERF061 OS=Arabidopsis thaliana GN=ERF061 PE=2 SV=1
trembl
ID A0A067JN59
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20463 PE=4 SV=1
Gene Ontology
ID GO:0003677
description ethylene-responsive transcription factor erf061

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007383_050 0.0 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF061 [Jatropha curcas]
2 Hb_001411_150 0.0397156539 - - Dormancy/auxin associated family protein, putative [Theobroma cacao]
3 Hb_001168_100 0.0792913513 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Citrus sinensis]
4 Hb_009189_010 0.0824805869 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
5 Hb_004267_070 0.0872302751 - - latex allene oxide synthase [Hevea brasiliensis]
6 Hb_000347_370 0.0929489733 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
7 Hb_089140_020 0.0982085001 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
8 Hb_001289_030 0.101012171 - - syntaxin, plant, putative [Ricinus communis]
9 Hb_004531_010 0.108134608 - - PREDICTED: ankyrin repeat-containing protein At2g01680-like [Jatropha curcas]
10 Hb_025477_020 0.1082411304 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF027 [Jatropha curcas]
11 Hb_000347_360 0.1155729333 - - PREDICTED: linoleate 13S-lipoxygenase 3-1, chloroplastic [Jatropha curcas]
12 Hb_007305_040 0.1173695629 - - Nodulin-26, putative [Ricinus communis]
13 Hb_073870_020 0.1175058445 - - PREDICTED: probable receptor-like protein kinase At1g67000, partial [Jatropha curcas]
14 Hb_002922_010 0.119938953 - - heavy-metal-associated domain-containing family protein [Populus trichocarpa]
15 Hb_000210_150 0.1227693163 - - PREDICTED: protein YLS9-like [Jatropha curcas]
16 Hb_010417_120 0.1228672711 - - conserved hypothetical protein [Ricinus communis]
17 Hb_003582_020 0.1237428904 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Eucalyptus grandis]
18 Hb_009683_010 0.1262425044 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
19 Hb_027214_060 0.1288646207 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
20 Hb_007433_020 0.1299978352 - - hypothetical protein VITISV_005320 [Vitis vinifera]

Gene co-expression network

sample Hb_007383_050 Hb_007383_050 Hb_001411_150 Hb_001411_150 Hb_007383_050--Hb_001411_150 Hb_001168_100 Hb_001168_100 Hb_007383_050--Hb_001168_100 Hb_009189_010 Hb_009189_010 Hb_007383_050--Hb_009189_010 Hb_004267_070 Hb_004267_070 Hb_007383_050--Hb_004267_070 Hb_000347_370 Hb_000347_370 Hb_007383_050--Hb_000347_370 Hb_089140_020 Hb_089140_020 Hb_007383_050--Hb_089140_020 Hb_001411_150--Hb_009189_010 Hb_001289_030 Hb_001289_030 Hb_001411_150--Hb_001289_030 Hb_001411_150--Hb_004267_070 Hb_001411_150--Hb_001168_100 Hb_001411_150--Hb_089140_020 Hb_001168_100--Hb_000347_370 Hb_001168_100--Hb_004267_070 Hb_001168_100--Hb_089140_020 Hb_002475_110 Hb_002475_110 Hb_001168_100--Hb_002475_110 Hb_073870_020 Hb_073870_020 Hb_009189_010--Hb_073870_020 Hb_002849_030 Hb_002849_030 Hb_009189_010--Hb_002849_030 Hb_000347_360 Hb_000347_360 Hb_009189_010--Hb_000347_360 Hb_009189_010--Hb_001289_030 Hb_004267_070--Hb_000347_370 Hb_000210_150 Hb_000210_150 Hb_004267_070--Hb_000210_150 Hb_004267_070--Hb_089140_020 Hb_011928_030 Hb_011928_030 Hb_000347_370--Hb_011928_030 Hb_007305_040 Hb_007305_040 Hb_000347_370--Hb_007305_040 Hb_133646_010 Hb_133646_010 Hb_000347_370--Hb_133646_010 Hb_189242_010 Hb_189242_010 Hb_089140_020--Hb_189242_010 Hb_055706_010 Hb_055706_010 Hb_089140_020--Hb_055706_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 13.0604 1.61008 2.29796 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.82737 0.342199

CAGE analysis