Hb_133646_010

Information

Type -
Description -
Location Contig133646: 515-1429
Sequence    

Annotation

kegg
ID rcu:RCOM_1044030
description hypothetical protein
nr
ID XP_002523462.1
description hypothetical protein RCOM_1044030 [Ricinus communis]
swissprot
ID Q9FL92
description Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1
trembl
ID B9SBU3
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1044030 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_133646_010 0.0 - - hypothetical protein RCOM_1044030 [Ricinus communis]
2 Hb_176149_010 0.0952306521 - - hypothetical protein JCGZ_16793 [Jatropha curcas]
3 Hb_000656_360 0.0983314547 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
4 Hb_004098_010 0.1017555936 - - -
5 Hb_027913_010 0.1031796242 - - ankyrin repeat-containing protein, putative [Ricinus communis]
6 Hb_000347_370 0.1047400815 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
7 Hb_001510_050 0.1083264429 - - zinc finger protein, putative [Ricinus communis]
8 Hb_029866_140 0.109891642 - - PREDICTED: hevamine-A [Jatropha curcas]
9 Hb_007371_010 0.112824145 transcription factor TF Family: GRAS PREDICTED: protein SHORT-ROOT-like [Populus euphratica]
10 Hb_000128_010 0.1178761495 - - dimethylaniline monooxygenase, putative [Ricinus communis]
11 Hb_000369_150 0.1184681794 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_20185 [Jatropha curcas]
12 Hb_001168_100 0.1203298289 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Citrus sinensis]
13 Hb_000627_140 0.1215520414 - - ATP binding protein, putative [Ricinus communis]
14 Hb_004161_010 0.1239883218 - - hypothetical protein JCGZ_21278 [Jatropha curcas]
15 Hb_004656_030 0.1247228325 - - putative pectin methylesterase family protein [Populus trichocarpa]
16 Hb_001691_190 0.1257057357 - - conserved hypothetical protein [Ricinus communis]
17 Hb_119441_010 0.1323318568 - - hypothetical protein CISIN_1g0477971mg, partial [Citrus sinensis]
18 Hb_011928_030 0.1332504998 - - PREDICTED: probable calcium-binding protein CML23 [Jatropha curcas]
19 Hb_004586_380 0.1358989815 - - purine transporter, putative [Ricinus communis]
20 Hb_001437_200 0.1406949329 - - PREDICTED: UDP-glycosyltransferase 86A2 [Jatropha curcas]

Gene co-expression network

sample Hb_133646_010 Hb_133646_010 Hb_176149_010 Hb_176149_010 Hb_133646_010--Hb_176149_010 Hb_000656_360 Hb_000656_360 Hb_133646_010--Hb_000656_360 Hb_004098_010 Hb_004098_010 Hb_133646_010--Hb_004098_010 Hb_027913_010 Hb_027913_010 Hb_133646_010--Hb_027913_010 Hb_000347_370 Hb_000347_370 Hb_133646_010--Hb_000347_370 Hb_001510_050 Hb_001510_050 Hb_133646_010--Hb_001510_050 Hb_176149_010--Hb_004098_010 Hb_000128_010 Hb_000128_010 Hb_176149_010--Hb_000128_010 Hb_004586_380 Hb_004586_380 Hb_176149_010--Hb_004586_380 Hb_006351_080 Hb_006351_080 Hb_176149_010--Hb_006351_080 Hb_000369_150 Hb_000369_150 Hb_176149_010--Hb_000369_150 Hb_176149_010--Hb_000656_360 Hb_003847_140 Hb_003847_140 Hb_000656_360--Hb_003847_140 Hb_029866_140 Hb_029866_140 Hb_000656_360--Hb_029866_140 Hb_066262_010 Hb_066262_010 Hb_000656_360--Hb_066262_010 Hb_119441_010 Hb_119441_010 Hb_000656_360--Hb_119441_010 Hb_000656_360--Hb_000369_150 Hb_004098_010--Hb_000128_010 Hb_004098_010--Hb_000369_150 Hb_004098_010--Hb_119441_010 Hb_004098_010--Hb_001510_050 Hb_004098_010--Hb_006351_080 Hb_004656_030 Hb_004656_030 Hb_027913_010--Hb_004656_030 Hb_001190_020 Hb_001190_020 Hb_027913_010--Hb_001190_020 Hb_022630_010 Hb_022630_010 Hb_027913_010--Hb_022630_010 Hb_027913_010--Hb_000656_360 Hb_001437_200 Hb_001437_200 Hb_027913_010--Hb_001437_200 Hb_078477_010 Hb_078477_010 Hb_027913_010--Hb_078477_010 Hb_001168_100 Hb_001168_100 Hb_000347_370--Hb_001168_100 Hb_004267_070 Hb_004267_070 Hb_000347_370--Hb_004267_070 Hb_007383_050 Hb_007383_050 Hb_000347_370--Hb_007383_050 Hb_011928_030 Hb_011928_030 Hb_000347_370--Hb_011928_030 Hb_007305_040 Hb_007305_040 Hb_000347_370--Hb_007305_040 Hb_007371_010 Hb_007371_010 Hb_001510_050--Hb_007371_010 Hb_001510_050--Hb_000369_150 Hb_001510_050--Hb_176149_010 Hb_001510_050--Hb_000128_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.83429 0.0892995 0.653843 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.379131 0

CAGE analysis