Hb_029866_140

Information

Type -
Description -
Location Contig29866: 101179-102069
Sequence    

Annotation

kegg
ID rcu:RCOM_1581410
description hevamine-A precursor, putative (EC:3.2.1.17)
nr
ID XP_012090141.1
description PREDICTED: hevamine-A [Jatropha curcas]
swissprot
ID P23472
description Hevamine-A OS=Hevea brasiliensis PE=1 SV=2
trembl
ID A0A067JEE0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26021 PE=3 SV=1
Gene Ontology
ID GO:0004553
description hevamine-a-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31221: 101169-102187
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_029866_140 0.0 - - PREDICTED: hevamine-A [Jatropha curcas]
2 Hb_000656_360 0.0638210618 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
3 Hb_001376_020 0.0641085085 - - hypothetical protein JCGZ_01547 [Jatropha curcas]
4 Hb_003847_140 0.0937566721 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Jatropha curcas]
5 Hb_008707_020 0.0955621774 - - ATP binding protein, putative [Ricinus communis]
6 Hb_176149_010 0.0977812844 - - hypothetical protein JCGZ_16793 [Jatropha curcas]
7 Hb_011054_030 0.0995083145 - - PREDICTED: uncharacterized protein LOC103324687 [Prunus mume]
8 Hb_001749_020 0.1015520231 - - hypothetical protein CISIN_1g042220mg, partial [Citrus sinensis]
9 Hb_004586_380 0.1018447389 - - purine transporter, putative [Ricinus communis]
10 Hb_133646_010 0.109891642 - - hypothetical protein RCOM_1044030 [Ricinus communis]
11 Hb_000347_370 0.1125286141 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
12 Hb_001486_130 0.1142501027 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
13 Hb_006351_080 0.1143720112 - - hypothetical protein B456_011G275400 [Gossypium raimondii]
14 Hb_001274_040 0.1170140177 - - PREDICTED: uncharacterized protein LOC105636321 [Jatropha curcas]
15 Hb_001437_200 0.1178928635 - - PREDICTED: UDP-glycosyltransferase 86A2 [Jatropha curcas]
16 Hb_000035_360 0.120617483 - - PREDICTED: VQ motif-containing protein 31-like [Jatropha curcas]
17 Hb_001691_190 0.1217636404 - - conserved hypothetical protein [Ricinus communis]
18 Hb_004656_030 0.1244677403 - - putative pectin methylesterase family protein [Populus trichocarpa]
19 Hb_004161_010 0.1248184306 - - hypothetical protein JCGZ_21278 [Jatropha curcas]
20 Hb_066262_010 0.1259613208 - - hypothetical protein JCGZ_14798 [Jatropha curcas]

Gene co-expression network

sample Hb_029866_140 Hb_029866_140 Hb_000656_360 Hb_000656_360 Hb_029866_140--Hb_000656_360 Hb_001376_020 Hb_001376_020 Hb_029866_140--Hb_001376_020 Hb_003847_140 Hb_003847_140 Hb_029866_140--Hb_003847_140 Hb_008707_020 Hb_008707_020 Hb_029866_140--Hb_008707_020 Hb_176149_010 Hb_176149_010 Hb_029866_140--Hb_176149_010 Hb_011054_030 Hb_011054_030 Hb_029866_140--Hb_011054_030 Hb_000656_360--Hb_003847_140 Hb_000656_360--Hb_176149_010 Hb_066262_010 Hb_066262_010 Hb_000656_360--Hb_066262_010 Hb_119441_010 Hb_119441_010 Hb_000656_360--Hb_119441_010 Hb_000369_150 Hb_000369_150 Hb_000656_360--Hb_000369_150 Hb_001376_020--Hb_008707_020 Hb_001486_130 Hb_001486_130 Hb_001376_020--Hb_001486_130 Hb_001749_020 Hb_001749_020 Hb_001376_020--Hb_001749_020 Hb_000035_360 Hb_000035_360 Hb_001376_020--Hb_000035_360 Hb_001376_020--Hb_000656_360 Hb_003847_140--Hb_066262_010 Hb_003847_140--Hb_008707_020 Hb_005081_060 Hb_005081_060 Hb_003847_140--Hb_005081_060 Hb_011924_030 Hb_011924_030 Hb_003847_140--Hb_011924_030 Hb_008707_020--Hb_000035_360 Hb_039650_010 Hb_039650_010 Hb_008707_020--Hb_039650_010 Hb_008707_020--Hb_011924_030 Hb_008707_020--Hb_001486_130 Hb_004098_010 Hb_004098_010 Hb_176149_010--Hb_004098_010 Hb_000128_010 Hb_000128_010 Hb_176149_010--Hb_000128_010 Hb_004586_380 Hb_004586_380 Hb_176149_010--Hb_004586_380 Hb_006351_080 Hb_006351_080 Hb_176149_010--Hb_006351_080 Hb_176149_010--Hb_000369_150 Hb_000039_100 Hb_000039_100 Hb_011054_030--Hb_000039_100 Hb_005054_300 Hb_005054_300 Hb_011054_030--Hb_005054_300 Hb_021596_070 Hb_021596_070 Hb_011054_030--Hb_021596_070 Hb_111985_060 Hb_111985_060 Hb_011054_030--Hb_111985_060 Hb_008667_020 Hb_008667_020 Hb_011054_030--Hb_008667_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0320167 152.517 4.67158 14.8803 0.0479055 0.0450875
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 22.2277 1.30881

CAGE analysis