Hb_008707_020

Information

Type -
Description -
Location Contig8707: 9053-12513
Sequence    

Annotation

kegg
ID rcu:RCOM_1581480
description ATP binding protein, putative (EC:2.7.11.10)
nr
ID XP_002513619.1
description ATP binding protein, putative [Ricinus communis]
swissprot
ID Q9FLV4
description G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana GN=At5g24080 PE=2 SV=1
trembl
ID B9RIQ0
description Serine/threonine-protein kinase OS=Ricinus communis GN=RCOM_1581480 PE=3 SV=1
Gene Ontology
ID GO:0004674
description g-type lectin s-receptor-like serine threonine-protein kinase at5g24080

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61164: 9591-10225 , PASA_asmbl_61165: 10721-11156
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008707_020 0.0 - - ATP binding protein, putative [Ricinus communis]
2 Hb_001376_020 0.0600941221 - - hypothetical protein JCGZ_01547 [Jatropha curcas]
3 Hb_000035_360 0.0678423112 - - PREDICTED: VQ motif-containing protein 31-like [Jatropha curcas]
4 Hb_003847_140 0.0807032772 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Jatropha curcas]
5 Hb_039650_010 0.0851182893 - - cellulose synthase-like protein [Populus tomentosa]
6 Hb_011924_030 0.0875441517 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_001486_130 0.0930386336 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
8 Hb_029866_140 0.0955621774 - - PREDICTED: hevamine-A [Jatropha curcas]
9 Hb_000284_060 0.0958742315 desease resistance Gene Name: NB-ARC disease resistance protein (TIR-NBS-LRR class), putative [Medicago truncatula]
10 Hb_001749_020 0.0971249011 - - hypothetical protein CISIN_1g042220mg, partial [Citrus sinensis]
11 Hb_000656_360 0.0989965623 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
12 Hb_001274_040 0.1050238391 - - PREDICTED: uncharacterized protein LOC105636321 [Jatropha curcas]
13 Hb_005081_060 0.1106617627 - - hypothetical protein EUGRSUZ_C00833 [Eucalyptus grandis]
14 Hb_002025_370 0.1131337633 - - monooxygenase, putative [Ricinus communis]
15 Hb_000233_060 0.1135265384 - - hypothetical protein JCGZ_14793 [Jatropha curcas]
16 Hb_066262_010 0.114275574 - - hypothetical protein JCGZ_14798 [Jatropha curcas]
17 Hb_001403_070 0.114702908 - - PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X1 [Populus euphratica]
18 Hb_005000_230 0.1177353433 transcription factor TF Family: bHLH PREDICTED: putative transcription factor bHLH041 [Jatropha curcas]
19 Hb_011054_030 0.1244587202 - - PREDICTED: uncharacterized protein LOC103324687 [Prunus mume]
20 Hb_004652_050 0.1255242904 - - hypothetical protein POPTR_0001s15360g [Populus trichocarpa]

Gene co-expression network

sample Hb_008707_020 Hb_008707_020 Hb_001376_020 Hb_001376_020 Hb_008707_020--Hb_001376_020 Hb_000035_360 Hb_000035_360 Hb_008707_020--Hb_000035_360 Hb_003847_140 Hb_003847_140 Hb_008707_020--Hb_003847_140 Hb_039650_010 Hb_039650_010 Hb_008707_020--Hb_039650_010 Hb_011924_030 Hb_011924_030 Hb_008707_020--Hb_011924_030 Hb_001486_130 Hb_001486_130 Hb_008707_020--Hb_001486_130 Hb_029866_140 Hb_029866_140 Hb_001376_020--Hb_029866_140 Hb_001376_020--Hb_001486_130 Hb_001749_020 Hb_001749_020 Hb_001376_020--Hb_001749_020 Hb_001376_020--Hb_000035_360 Hb_000656_360 Hb_000656_360 Hb_001376_020--Hb_000656_360 Hb_000233_060 Hb_000233_060 Hb_000035_360--Hb_000233_060 Hb_000035_360--Hb_011924_030 Hb_000284_060 Hb_000284_060 Hb_000035_360--Hb_000284_060 Hb_001331_050 Hb_001331_050 Hb_000035_360--Hb_001331_050 Hb_003847_140--Hb_000656_360 Hb_066262_010 Hb_066262_010 Hb_003847_140--Hb_066262_010 Hb_005081_060 Hb_005081_060 Hb_003847_140--Hb_005081_060 Hb_003847_140--Hb_011924_030 Hb_003847_140--Hb_029866_140 Hb_005000_230 Hb_005000_230 Hb_039650_010--Hb_005000_230 Hb_039650_010--Hb_011924_030 Hb_039650_010--Hb_000284_060 Hb_002025_370 Hb_002025_370 Hb_039650_010--Hb_002025_370 Hb_039650_010--Hb_005081_060 Hb_000871_020 Hb_000871_020 Hb_011924_030--Hb_000871_020 Hb_011924_030--Hb_000284_060 Hb_000796_100 Hb_000796_100 Hb_011924_030--Hb_000796_100 Hb_009740_010 Hb_009740_010 Hb_011924_030--Hb_009740_010 Hb_001486_130--Hb_001749_020 Hb_001403_070 Hb_001403_070 Hb_001486_130--Hb_001403_070 Hb_004931_050 Hb_004931_050 Hb_001486_130--Hb_004931_050 Hb_001486_130--Hb_000035_360
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 5.29583 0.109124 0.219763 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0163678 0 0 0.685021 0.0822593

CAGE analysis