Hb_000284_060

Information

Type desease resistance
Description Gene Name: NB-ARC
Location Contig284: 107885-114686
Sequence    

Annotation

kegg
ID ath:AT5G38340
description TIR-NBS-LRR class disease resistance protein
nr
ID KEH28833.1
description disease resistance protein (TIR-NBS-LRR class), putative [Medicago truncatula]
swissprot
ID Q9FW44
description Disease resistance protein ADR1 OS=Arabidopsis thaliana GN=ADR1 PE=2 SV=2
trembl
ID A0A067KRT0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04979 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000284_060 0.0 desease resistance Gene Name: NB-ARC disease resistance protein (TIR-NBS-LRR class), putative [Medicago truncatula]
2 Hb_011924_030 0.0804306414 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_039650_010 0.0899986604 - - cellulose synthase-like protein [Populus tomentosa]
4 Hb_000035_360 0.0935512508 - - PREDICTED: VQ motif-containing protein 31-like [Jatropha curcas]
5 Hb_008707_020 0.0958742315 - - ATP binding protein, putative [Ricinus communis]
6 Hb_000871_020 0.0987489733 - - receptor-kinase, putative [Ricinus communis]
7 Hb_000233_060 0.1040270949 - - hypothetical protein JCGZ_14793 [Jatropha curcas]
8 Hb_003847_140 0.1076735014 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Jatropha curcas]
9 Hb_004940_090 0.1128164713 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
10 Hb_002025_370 0.1172926482 - - monooxygenase, putative [Ricinus communis]
11 Hb_066262_010 0.1180007409 - - hypothetical protein JCGZ_14798 [Jatropha curcas]
12 Hb_126024_010 0.1183378153 - - PREDICTED: probable aldo-keto reductase 1 [Populus euphratica]
13 Hb_006353_010 0.1202813584 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105634775 [Jatropha curcas]
14 Hb_005000_230 0.1225197901 transcription factor TF Family: bHLH PREDICTED: putative transcription factor bHLH041 [Jatropha curcas]
15 Hb_009740_010 0.1239402776 - - receptor-kinase, putative [Ricinus communis]
16 Hb_000796_100 0.1255960928 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
17 Hb_064855_010 0.1276443589 - - ankyrin repeat-containing protein, putative [Ricinus communis]
18 Hb_004652_050 0.130188612 - - hypothetical protein POPTR_0001s15360g [Populus trichocarpa]
19 Hb_005081_060 0.1305729487 - - hypothetical protein EUGRSUZ_C00833 [Eucalyptus grandis]
20 Hb_001376_020 0.1313349052 - - hypothetical protein JCGZ_01547 [Jatropha curcas]

Gene co-expression network

sample Hb_000284_060 Hb_000284_060 Hb_011924_030 Hb_011924_030 Hb_000284_060--Hb_011924_030 Hb_039650_010 Hb_039650_010 Hb_000284_060--Hb_039650_010 Hb_000035_360 Hb_000035_360 Hb_000284_060--Hb_000035_360 Hb_008707_020 Hb_008707_020 Hb_000284_060--Hb_008707_020 Hb_000871_020 Hb_000871_020 Hb_000284_060--Hb_000871_020 Hb_000233_060 Hb_000233_060 Hb_000284_060--Hb_000233_060 Hb_011924_030--Hb_000871_020 Hb_011924_030--Hb_000035_360 Hb_003847_140 Hb_003847_140 Hb_011924_030--Hb_003847_140 Hb_000796_100 Hb_000796_100 Hb_011924_030--Hb_000796_100 Hb_009740_010 Hb_009740_010 Hb_011924_030--Hb_009740_010 Hb_005000_230 Hb_005000_230 Hb_039650_010--Hb_005000_230 Hb_039650_010--Hb_008707_020 Hb_039650_010--Hb_011924_030 Hb_002025_370 Hb_002025_370 Hb_039650_010--Hb_002025_370 Hb_005081_060 Hb_005081_060 Hb_039650_010--Hb_005081_060 Hb_000035_360--Hb_008707_020 Hb_000035_360--Hb_000233_060 Hb_001376_020 Hb_001376_020 Hb_000035_360--Hb_001376_020 Hb_001331_050 Hb_001331_050 Hb_000035_360--Hb_001331_050 Hb_008707_020--Hb_001376_020 Hb_008707_020--Hb_003847_140 Hb_008707_020--Hb_011924_030 Hb_001486_130 Hb_001486_130 Hb_008707_020--Hb_001486_130 Hb_000871_020--Hb_009740_010 Hb_023827_010 Hb_023827_010 Hb_000871_020--Hb_023827_010 Hb_030593_010 Hb_030593_010 Hb_000871_020--Hb_030593_010 Hb_001766_090 Hb_001766_090 Hb_000871_020--Hb_001766_090 Hb_064855_010 Hb_064855_010 Hb_000871_020--Hb_064855_010 Hb_066262_010 Hb_066262_010 Hb_000233_060--Hb_066262_010 Hb_000233_060--Hb_001331_050 Hb_066262_020 Hb_066262_020 Hb_000233_060--Hb_066262_020 Hb_000233_060--Hb_011924_030 Hb_002067_110 Hb_002067_110 Hb_000233_060--Hb_002067_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0147717 15.9305 0.0794952 0.359781 0 0.0133716
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0167588 0 0.125825 1.88459 0.280616

CAGE analysis