Hb_000035_360

Information

Type -
Description -
Location Contig35: 378067-378630
Sequence    

Annotation

kegg
ID rcu:RCOM_0920500
description hypothetical protein
nr
ID XP_012076396.1
description PREDICTED: VQ motif-containing protein 31-like [Jatropha curcas]
swissprot
ID Q5M750
description VQ motif-containing protein 4 OS=Arabidopsis thaliana GN=VQ4 PE=1 SV=1
trembl
ID A0A067KEQ3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07064 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000035_360 0.0 - - PREDICTED: VQ motif-containing protein 31-like [Jatropha curcas]
2 Hb_008707_020 0.0678423112 - - ATP binding protein, putative [Ricinus communis]
3 Hb_000233_060 0.0744842085 - - hypothetical protein JCGZ_14793 [Jatropha curcas]
4 Hb_011924_030 0.0791112575 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_001376_020 0.088185532 - - hypothetical protein JCGZ_01547 [Jatropha curcas]
6 Hb_000284_060 0.0935512508 desease resistance Gene Name: NB-ARC disease resistance protein (TIR-NBS-LRR class), putative [Medicago truncatula]
7 Hb_001331_050 0.0967440556 - - hypothetical protein VITISV_022439 [Vitis vinifera]
8 Hb_066262_020 0.0999013289 - - hypothetical protein JCGZ_14803 [Jatropha curcas]
9 Hb_000844_020 0.1002285523 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF1.6 [Jatropha curcas]
10 Hb_003847_140 0.1005184163 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Jatropha curcas]
11 Hb_002067_110 0.1008675378 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Populus euphratica]
12 Hb_005643_010 0.1024104774 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
13 Hb_000796_100 0.1026525592 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
14 Hb_007785_020 0.1058648292 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
15 Hb_006353_010 0.106109675 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105634775 [Jatropha curcas]
16 Hb_000277_020 0.1063906249 - - hypothetical protein JCGZ_08656 [Jatropha curcas]
17 Hb_064855_010 0.1087813314 - - ankyrin repeat-containing protein, putative [Ricinus communis]
18 Hb_045810_010 0.1093206654 - - PREDICTED: laccase-12-like [Jatropha curcas]
19 Hb_001486_130 0.1137733476 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
20 Hb_000977_160 0.1151506442 - - Serine-threonine protein kinase, plant-type, putative [Theobroma cacao]

Gene co-expression network

sample Hb_000035_360 Hb_000035_360 Hb_008707_020 Hb_008707_020 Hb_000035_360--Hb_008707_020 Hb_000233_060 Hb_000233_060 Hb_000035_360--Hb_000233_060 Hb_011924_030 Hb_011924_030 Hb_000035_360--Hb_011924_030 Hb_001376_020 Hb_001376_020 Hb_000035_360--Hb_001376_020 Hb_000284_060 Hb_000284_060 Hb_000035_360--Hb_000284_060 Hb_001331_050 Hb_001331_050 Hb_000035_360--Hb_001331_050 Hb_008707_020--Hb_001376_020 Hb_003847_140 Hb_003847_140 Hb_008707_020--Hb_003847_140 Hb_039650_010 Hb_039650_010 Hb_008707_020--Hb_039650_010 Hb_008707_020--Hb_011924_030 Hb_001486_130 Hb_001486_130 Hb_008707_020--Hb_001486_130 Hb_066262_010 Hb_066262_010 Hb_000233_060--Hb_066262_010 Hb_000233_060--Hb_001331_050 Hb_066262_020 Hb_066262_020 Hb_000233_060--Hb_066262_020 Hb_000233_060--Hb_011924_030 Hb_002067_110 Hb_002067_110 Hb_000233_060--Hb_002067_110 Hb_000871_020 Hb_000871_020 Hb_011924_030--Hb_000871_020 Hb_011924_030--Hb_000284_060 Hb_011924_030--Hb_003847_140 Hb_000796_100 Hb_000796_100 Hb_011924_030--Hb_000796_100 Hb_009740_010 Hb_009740_010 Hb_011924_030--Hb_009740_010 Hb_029866_140 Hb_029866_140 Hb_001376_020--Hb_029866_140 Hb_001376_020--Hb_001486_130 Hb_001749_020 Hb_001749_020 Hb_001376_020--Hb_001749_020 Hb_000656_360 Hb_000656_360 Hb_001376_020--Hb_000656_360 Hb_000284_060--Hb_039650_010 Hb_000284_060--Hb_008707_020 Hb_000284_060--Hb_000871_020 Hb_000284_060--Hb_000233_060 Hb_005643_010 Hb_005643_010 Hb_001331_050--Hb_005643_010 Hb_119441_010 Hb_119441_010 Hb_001331_050--Hb_119441_010 Hb_000369_150 Hb_000369_150 Hb_001331_050--Hb_000369_150 Hb_000879_100 Hb_000879_100 Hb_001331_050--Hb_000879_100 Hb_045810_010 Hb_045810_010 Hb_001331_050--Hb_045810_010 Hb_006351_080 Hb_006351_080 Hb_001331_050--Hb_006351_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 66.0683 0.516356 2.25234 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.11087 0 0 11.2633 0.50053

CAGE analysis