Hb_000369_150

Information

Type desease resistance
Description Gene Name: NB-ARC
Location Contig369: 199342-202184
Sequence    

Annotation

kegg
ID rcu:RCOM_0902160
description TMV resistance protein N, putative
nr
ID KDP27361.1
description hypothetical protein JCGZ_20185 [Jatropha curcas]
swissprot
ID Q40392
description TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
trembl
ID A0A067JTS0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20185 PE=4 SV=1
Gene Ontology
ID GO:0000166
description tmv resistance protein n-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000369_150 0.0 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_20185 [Jatropha curcas]
2 Hb_119441_010 0.0239272987 - - hypothetical protein CISIN_1g0477971mg, partial [Citrus sinensis]
3 Hb_004098_010 0.0462002139 - - -
4 Hb_000879_100 0.0685128899 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
5 Hb_000128_010 0.0723130637 - - dimethylaniline monooxygenase, putative [Ricinus communis]
6 Hb_176149_010 0.0731172476 - - hypothetical protein JCGZ_16793 [Jatropha curcas]
7 Hb_005643_010 0.0735069686 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
8 Hb_001331_050 0.0769096286 - - hypothetical protein VITISV_022439 [Vitis vinifera]
9 Hb_000656_360 0.0878139936 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
10 Hb_006351_080 0.1012224419 - - hypothetical protein B456_011G275400 [Gossypium raimondii]
11 Hb_066262_010 0.1019310146 - - hypothetical protein JCGZ_14798 [Jatropha curcas]
12 Hb_001510_050 0.1029918484 - - zinc finger protein, putative [Ricinus communis]
13 Hb_004586_380 0.1065833881 - - purine transporter, putative [Ricinus communis]
14 Hb_003847_140 0.1085749023 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Jatropha curcas]
15 Hb_005163_010 0.1096455548 - - PREDICTED: probable terpene synthase 11 [Jatropha curcas]
16 Hb_133646_010 0.1184681794 - - hypothetical protein RCOM_1044030 [Ricinus communis]
17 Hb_004656_030 0.1293747029 - - putative pectin methylesterase family protein [Populus trichocarpa]
18 Hb_007371_010 0.1311715373 transcription factor TF Family: GRAS PREDICTED: protein SHORT-ROOT-like [Populus euphratica]
19 Hb_000277_020 0.1312272691 - - hypothetical protein JCGZ_08656 [Jatropha curcas]
20 Hb_010368_040 0.1331907741 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000369_150 Hb_000369_150 Hb_119441_010 Hb_119441_010 Hb_000369_150--Hb_119441_010 Hb_004098_010 Hb_004098_010 Hb_000369_150--Hb_004098_010 Hb_000879_100 Hb_000879_100 Hb_000369_150--Hb_000879_100 Hb_000128_010 Hb_000128_010 Hb_000369_150--Hb_000128_010 Hb_176149_010 Hb_176149_010 Hb_000369_150--Hb_176149_010 Hb_005643_010 Hb_005643_010 Hb_000369_150--Hb_005643_010 Hb_119441_010--Hb_005643_010 Hb_001331_050 Hb_001331_050 Hb_119441_010--Hb_001331_050 Hb_119441_010--Hb_000879_100 Hb_119441_010--Hb_004098_010 Hb_119441_010--Hb_000128_010 Hb_004098_010--Hb_000128_010 Hb_004098_010--Hb_176149_010 Hb_001510_050 Hb_001510_050 Hb_004098_010--Hb_001510_050 Hb_006351_080 Hb_006351_080 Hb_004098_010--Hb_006351_080 Hb_000879_100--Hb_005643_010 Hb_000879_100--Hb_001331_050 Hb_066262_010 Hb_066262_010 Hb_000879_100--Hb_066262_010 Hb_003847_140 Hb_003847_140 Hb_000879_100--Hb_003847_140 Hb_000128_010--Hb_176149_010 Hb_000128_010--Hb_006351_080 Hb_004586_380 Hb_004586_380 Hb_000128_010--Hb_004586_380 Hb_176149_010--Hb_004586_380 Hb_176149_010--Hb_006351_080 Hb_000656_360 Hb_000656_360 Hb_176149_010--Hb_000656_360 Hb_005643_010--Hb_001331_050 Hb_005643_010--Hb_066262_010 Hb_000277_020 Hb_000277_020 Hb_005643_010--Hb_000277_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.059488 0 0.00590165 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0059528 0

CAGE analysis