Hb_004586_380

Information

Type -
Description -
Location Contig4586: 385457-387513
Sequence    

Annotation

kegg
ID rcu:RCOM_1038370
description purine transporter, putative
nr
ID XP_002513994.1
description purine transporter, putative [Ricinus communis]
swissprot
ID Q9FZ95
description Purine permease 3 OS=Arabidopsis thaliana GN=PUP3 PE=2 SV=1
trembl
ID B9RJS5
description Purine transporter, putative OS=Ricinus communis GN=RCOM_1038370 PE=4 SV=1
Gene Ontology
ID GO:0016021
description purine permease 3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004586_380 0.0 - - purine transporter, putative [Ricinus communis]
2 Hb_006351_080 0.0356454009 - - hypothetical protein B456_011G275400 [Gossypium raimondii]
3 Hb_176149_010 0.0636681644 - - hypothetical protein JCGZ_16793 [Jatropha curcas]
4 Hb_000128_010 0.0749571824 - - dimethylaniline monooxygenase, putative [Ricinus communis]
5 Hb_004098_010 0.0975930303 - - -
6 Hb_000656_360 0.0995589935 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
7 Hb_119441_010 0.1010337306 - - hypothetical protein CISIN_1g0477971mg, partial [Citrus sinensis]
8 Hb_029866_140 0.1018447389 - - PREDICTED: hevamine-A [Jatropha curcas]
9 Hb_001331_050 0.1032434344 - - hypothetical protein VITISV_022439 [Vitis vinifera]
10 Hb_000369_150 0.1065833881 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_20185 [Jatropha curcas]
11 Hb_045810_010 0.1102641605 - - PREDICTED: laccase-12-like [Jatropha curcas]
12 Hb_000170_230 0.1166527839 - - PREDICTED: probable receptor-like protein kinase At1g11050 isoform X1 [Jatropha curcas]
13 Hb_005643_010 0.1177586362 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
14 Hb_000532_060 0.1201826286 - - copper-transporting atpase p-type, putative [Ricinus communis]
15 Hb_003847_140 0.1210391651 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Jatropha curcas]
16 Hb_000035_360 0.121641379 - - PREDICTED: VQ motif-containing protein 31-like [Jatropha curcas]
17 Hb_001691_190 0.1234613346 - - conserved hypothetical protein [Ricinus communis]
18 Hb_066262_010 0.1245410314 - - hypothetical protein JCGZ_14798 [Jatropha curcas]
19 Hb_000233_060 0.1260610938 - - hypothetical protein JCGZ_14793 [Jatropha curcas]
20 Hb_000940_020 0.1289787968 - - hypothetical protein POPTR_0004s17500g [Populus trichocarpa]

Gene co-expression network

sample Hb_004586_380 Hb_004586_380 Hb_006351_080 Hb_006351_080 Hb_004586_380--Hb_006351_080 Hb_176149_010 Hb_176149_010 Hb_004586_380--Hb_176149_010 Hb_000128_010 Hb_000128_010 Hb_004586_380--Hb_000128_010 Hb_004098_010 Hb_004098_010 Hb_004586_380--Hb_004098_010 Hb_000656_360 Hb_000656_360 Hb_004586_380--Hb_000656_360 Hb_119441_010 Hb_119441_010 Hb_004586_380--Hb_119441_010 Hb_006351_080--Hb_176149_010 Hb_006351_080--Hb_000128_010 Hb_001331_050 Hb_001331_050 Hb_006351_080--Hb_001331_050 Hb_006351_080--Hb_119441_010 Hb_045810_010 Hb_045810_010 Hb_006351_080--Hb_045810_010 Hb_176149_010--Hb_004098_010 Hb_176149_010--Hb_000128_010 Hb_000369_150 Hb_000369_150 Hb_176149_010--Hb_000369_150 Hb_176149_010--Hb_000656_360 Hb_000128_010--Hb_004098_010 Hb_000128_010--Hb_000369_150 Hb_000128_010--Hb_119441_010 Hb_004098_010--Hb_000369_150 Hb_004098_010--Hb_119441_010 Hb_001510_050 Hb_001510_050 Hb_004098_010--Hb_001510_050 Hb_004098_010--Hb_006351_080 Hb_003847_140 Hb_003847_140 Hb_000656_360--Hb_003847_140 Hb_029866_140 Hb_029866_140 Hb_000656_360--Hb_029866_140 Hb_066262_010 Hb_066262_010 Hb_000656_360--Hb_066262_010 Hb_000656_360--Hb_119441_010 Hb_000656_360--Hb_000369_150 Hb_119441_010--Hb_000369_150 Hb_005643_010 Hb_005643_010 Hb_119441_010--Hb_005643_010 Hb_119441_010--Hb_001331_050 Hb_000879_100 Hb_000879_100 Hb_119441_010--Hb_000879_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0544222 47.9695 0.179493 5.40641 0.0448453 0.0684453
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0355697 0 0 9.18516 0.11649

CAGE analysis