Hb_006351_080

Information

Type -
Description -
Location Contig6351: 91359-100838
Sequence    

Annotation

kegg
ID pvu:PHAVU_010G001300g
description hypothetical protein
nr
ID KJB74146.1
description hypothetical protein B456_011G275400 [Gossypium raimondii]
swissprot
ID Q9SGA8
description UDP-glycosyltransferase 83A1 OS=Arabidopsis thaliana GN=UGT83A1 PE=2 SV=1
trembl
ID A0A0D2UYN3
description Gossypium raimondii chromosome 11, whole genome shotgun sequence OS=Gossypium raimondii GN=B456_011G275400 PE=4 SV=1
Gene Ontology
ID GO:0016758
description udp-glucosyltransferase family 1 protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006351_080 0.0 - - hypothetical protein B456_011G275400 [Gossypium raimondii]
2 Hb_004586_380 0.0356454009 - - purine transporter, putative [Ricinus communis]
3 Hb_176149_010 0.0699727773 - - hypothetical protein JCGZ_16793 [Jatropha curcas]
4 Hb_000128_010 0.0713188204 - - dimethylaniline monooxygenase, putative [Ricinus communis]
5 Hb_001331_050 0.0895667742 - - hypothetical protein VITISV_022439 [Vitis vinifera]
6 Hb_119441_010 0.0927363604 - - hypothetical protein CISIN_1g0477971mg, partial [Citrus sinensis]
7 Hb_045810_010 0.0954892159 - - PREDICTED: laccase-12-like [Jatropha curcas]
8 Hb_004098_010 0.0960317983 - - -
9 Hb_000369_150 0.1012224419 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_20185 [Jatropha curcas]
10 Hb_005643_010 0.1057424579 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
11 Hb_000656_360 0.1060064682 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
12 Hb_029866_140 0.1143720112 - - PREDICTED: hevamine-A [Jatropha curcas]
13 Hb_007785_020 0.1145563452 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
14 Hb_000277_020 0.1180221169 - - hypothetical protein JCGZ_08656 [Jatropha curcas]
15 Hb_000035_360 0.1209047443 - - PREDICTED: VQ motif-containing protein 31-like [Jatropha curcas]
16 Hb_000233_060 0.1210751291 - - hypothetical protein JCGZ_14793 [Jatropha curcas]
17 Hb_000170_230 0.1229332601 - - PREDICTED: probable receptor-like protein kinase At1g11050 isoform X1 [Jatropha curcas]
18 Hb_003847_140 0.125048799 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Jatropha curcas]
19 Hb_066262_010 0.1261851168 - - hypothetical protein JCGZ_14798 [Jatropha curcas]
20 Hb_000532_060 0.1281186246 - - copper-transporting atpase p-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_006351_080 Hb_006351_080 Hb_004586_380 Hb_004586_380 Hb_006351_080--Hb_004586_380 Hb_176149_010 Hb_176149_010 Hb_006351_080--Hb_176149_010 Hb_000128_010 Hb_000128_010 Hb_006351_080--Hb_000128_010 Hb_001331_050 Hb_001331_050 Hb_006351_080--Hb_001331_050 Hb_119441_010 Hb_119441_010 Hb_006351_080--Hb_119441_010 Hb_045810_010 Hb_045810_010 Hb_006351_080--Hb_045810_010 Hb_004586_380--Hb_176149_010 Hb_004586_380--Hb_000128_010 Hb_004098_010 Hb_004098_010 Hb_004586_380--Hb_004098_010 Hb_000656_360 Hb_000656_360 Hb_004586_380--Hb_000656_360 Hb_004586_380--Hb_119441_010 Hb_176149_010--Hb_004098_010 Hb_176149_010--Hb_000128_010 Hb_000369_150 Hb_000369_150 Hb_176149_010--Hb_000369_150 Hb_176149_010--Hb_000656_360 Hb_000128_010--Hb_004098_010 Hb_000128_010--Hb_000369_150 Hb_000128_010--Hb_119441_010 Hb_005643_010 Hb_005643_010 Hb_001331_050--Hb_005643_010 Hb_001331_050--Hb_119441_010 Hb_001331_050--Hb_000369_150 Hb_000879_100 Hb_000879_100 Hb_001331_050--Hb_000879_100 Hb_001331_050--Hb_045810_010 Hb_119441_010--Hb_000369_150 Hb_119441_010--Hb_005643_010 Hb_119441_010--Hb_000879_100 Hb_119441_010--Hb_004098_010 Hb_007785_020 Hb_007785_020 Hb_045810_010--Hb_007785_020 Hb_002067_110 Hb_002067_110 Hb_045810_010--Hb_002067_110 Hb_000844_020 Hb_000844_020 Hb_045810_010--Hb_000844_020 Hb_000233_060 Hb_000233_060 Hb_045810_010--Hb_000233_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00844756 18.0935 0.0308583 1.8626 0 0.0536756
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.50487 0.0259657

CAGE analysis